Query= MSMg01no304_g17.b1 MSMg01no304_g17.b1 CHROMAT_FILE:
MSMg01no304_g17.b1 PHD_FILE: MSMg01no304_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:43:02 2005
(775 letters)
>mm_chr9_122700933_122702107
Length = 1175
Score = 1468 bits (759), Expect = 0.0
Identities = 771/775 (99%)
Strand = Plus / Plus
Query: 1 actcagatatattcctgcttctgcctcctgagcactaggttaagaggcatgcacaaacta 60
|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
Sbjct: 201 actcagatatattcctgcttctgcctcctgagtactaggttaagagacatgcacaaacca 260
Query: 61 tgctcagcctcaaaataccttccctaagattaacccaaggtgttcacaatcatcaagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctcagcctcaaaataccttccctaagattaacccaaggtgttcacaatcatcaagact 320
Query: 121 gtttagaagtcaccgccttgaatactccaagacaccatgtgccacatgtctatgtctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttagaagtcaccgccttgaatactccaagacaccatgtgccacatgtctatgtctgac 380
Query: 181 tcttgatagagcccattatgcaggtgatcttgtgactcatttagttgtatatgtgcacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttgatagagcccattatgcaggtgatcttgtgactcatttagttgtatatgtgcacat 440
Query: 241 gtgtgcatacatgtgtacatatatgtatatgatgacatgcttgtggtagtcagaagttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtgcatacatgtgtacatatatgtatatgatgacatgcttgtggtagtcagaagttaa 500
Query: 301 tttacaaaaattggttctctcctgctattaatgtagtcttagggatctaagtcaggtcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttacaaaaattggttctctcctgctattaatgtagtcttagggatctaagtcaggtcat 560
Query: 361 gaggcttgctatcagagcctctaccctcagagccattttatcagccttcaaagctacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaggcttgctatcagagcctctaccctcagagccattttatcagccttcaaagctacact 620
Query: 421 gtatttattgcaccctttagatttccctgaaatgattgattgaattgtatactctacaaa 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 gtatttattgcaccctttagatttccctgaaatgactgattgaattgtatactctacaaa 680
Query: 481 gtccaaatagagggcatgaaaatccaatgtgaagggaagagctgaggatggaatcaacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtccaaatagagggcatgaaaatccaatgtgaagggaagagctgaggatggaatcaacag 740
Query: 541 aatgtgagattaagtatgatcactgtgaaattaagtgttaaagcttaggttctgttaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatgtgagattaagtatgatcactgtgaaattaagtgttaaagcttaggttctgttaact 800
Query: 601 ctggttagttcagaattggatggctgtgtggtaacatttaagcataggttcacttgtata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctggttagttcagaattggatggctgtgtggtaacatttaagcataggttcacttgtata 860
Query: 661 tatgcaacatacatggattaaaaagaatttttgcacccagagtggctaaacagaaagtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tatgcaacatacatggattaaaaagaatttttgcacccagagtggctaaacagaaagtct 920
Query: 721 ataggttttcaaattcaatgctcactatggtcagtgtgctgcagggtctaaggga 775
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 ataggttttcaaattcaatgctcactatggtcagtgtgctgcagggtctaaggga 975
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 775
Length of database: 1175
Length adjustment: 10
Effective length of query: 765
Effective length of database: 1165
Effective search space: 891225
Effective search space used: 891225
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no304_g17.g1 MSMg01no304_g17.g1 CHROMAT_FILE:
MSMg01no304_g17.g1 PHD_FILE: MSMg01no304_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:43:02 2005
(749 letters)
>mm_chr9_122847177_122848325
Length = 1149
Score = 1033 bits (534), Expect = 0.0
Identities = 541/544 (99%), Gaps = 2/544 (0%)
Strand = Plus / Minus
Query: 206 cattcccgacatttatatggctcttcttaagtatgaattcatcattgatctttaataagt 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 cattcccgacatttatatggctcttcttaagtatgaattcatcattgatctttaataagt 1090
Query: 266 gggttctgacaaaagactttgccacagtccttgcattgatagaatttctctcctgtataa 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 gggttctgacaaaagactttgccacagtccttgcattgatagaatttctctcctgtataa 1030
Query: 326 agtctctgatgttgtaagaaatttgtctttgcttggaaggacttttcacagttatgagtt 385
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1029 agtctctgatgttgtaagaaatttgtctttgcttggaaggacttttcacagt--tgagtt 972
Query: 386 ttatctccagtatgaaatctcttgtatgagatttgactgtttatgaaaaatatgaattct 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 ttatctccagtatgaaatctcttgtatgagatttgactgtttatgaaaaatatgaattct 912
Query: 446 catattctctgtgagttctccttcatgtcttcatatgcctacttattttcaaatgtaaaa 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 catattctctgtgagttctccttcatgtcttcatatgcctacttattttcaaatgtaaaa 852
Query: 506 tcctgatttcaatcaattttcatgtcatttcttcccggttatttctggtgagtcaatctg 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tcctgatttcaatcaattttcatgtcatttcttcccggttatttctggtgagtcaatctg 792
Query: 566 agaaatgcctcctctggatcagcatgtttcttccaaactgaaatggaagtaatcagtgaa 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 agaaatgcctcctctggatcagcatgtttcttccaaactgaaatggaagtaatcagtgaa 732
Query: 626 tagctggtgtgcagggaaaagaagtggcatggaagctacgggagacactgtcgtggggct 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tagctggtgtgcagggaaaagaagtggcatggaagctacgggagacactgtcgtggggct 672
Query: 686 gtgtctgagacagagatcttcaagggactgtgcttactgttcattagtgagcaacctcca 745
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 671 gtgtctgagacagagatcttcaagggactgtgcttactattcattagtgagcaacctcca 612
Query: 746 ctga 749
||||
Sbjct: 611 ctga 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 749
Length of database: 1149
Length adjustment: 10
Effective length of query: 739
Effective length of database: 1139
Effective search space: 841721
Effective search space used: 841721
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
