Query= MSMg01no305_j12.b1 MSMg01no305_j12.b1 CHROMAT_FILE:
MSMg01no305_j12.b1 PHD_FILE: MSMg01no305_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:43 2005
(391 letters)
>mm_chr9_120070496_120071286
Length = 791
Score = 708 bits (366), Expect = 0.0
Identities = 381/386 (98%)
Strand = Plus / Minus
Query: 1 caaaatgcccatacacataaaaataataagtaaataaataaacaaacaaataaataactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caaaatgcccatacacataaaaataataagtaaataaataaacaaacaaataaataactt 423
Query: 61 gattcctaatgtaggtcaatatacaaaatccaaacatttacaattcaaggatataatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gattcctaatgtaggtcaatatacaaaatccaaacatttacaattcaaggatataatata 363
Query: 121 tacaataaaagaagcaattcacactgaccataagaccactgaacatctacaggtagaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tacaataaaagaagcaattcacactgaccataagaccactgaacatctacaggtagaaat 303
Query: 181 acatcagacaaattaaataacaaccgtaagaaacgtacataaccagggatgaagagatgg 240
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 302 acatcagacgaattaaataacaaccgcaagaaacgtacataaccagggatgaagagatgg 243
Query: 241 ctcagcgattaaagacaaaagaccagggttcaattcccagcacccacttcaggcagctta 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctcagcgattaaagacaaaggaccagggttcaattcccagcacccacttcaggcagctta 183
Query: 301 caacatgtaactccaatgtcaatgagcacaacactgttctccagtttccacaggtaccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caacatgtaactccaatgtcaatgagcacaacactgttctccagtttccacaggtaccag 123
Query: 361 acacgcacacagtacacacatacaca 386
||| |||||||||||||||| |||||
Sbjct: 122 acatgcacacagtacacacacacaca 97
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_j12.g1 MSMg01no305_j12.g1 CHROMAT_FILE:
MSMg01no305_j12.g1 PHD_FILE: MSMg01no305_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:43 2005
(339 letters)
>mm_chr9_119891766_119892505
Length = 740
Score = 588 bits (304), Expect = e-172
Identities = 330/339 (97%), Gaps = 1/339 (0%)
Strand = Plus / Plus
Query: 1 acccgagtgactaagtgtgtggncgttgctgtggtgtaggcttttctacagtacatgaag 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccgagtgactaagtgtgtggccgttgctgtggtgtaggcttttctacagtacatgaag 260
Query: 61 gcgaccggacctccgggaaggggaaactgaggaaggagaggaaatgcatgcagaagaggg 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgaaaggacctccgggaaggggaaactgaggaaggagaggaaatgcatgcagaagaggg 320
Query: 121 agtagaggtgcgtgggagagagcctacgtgtgcccgcgggtggtcggtgtagctgcgccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtagaggtgcgtgggagagagcctacgtgtgcccgcgggtggtcggtgtagctgcgccc 380
Query: 181 cggtgactcacggcagtggcctctgagtgtgacggtgacaggtgaacatacgacacaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cggtgactcacggcagtggcctctgagtgtgacggtgacaggtgaacatacgacacaatc 440
Query: 241 cttctccccccc-cctccctcccggggtccgtgactcaccaagtttttttcattcctcac 299
|||||||||||| |||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 441 cttctcccccccgcctccctcccggggtccgtgactcaccaagcctcgctcattcctcac 500
Query: 300 tcatccctccaaaccctccctgacccccgcctgccgagg 338
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcatccctccaaaccctccctgacccccgcctgccgagg 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 740
Length adjustment: 9
Effective length of query: 330
Effective length of database: 731
Effective search space: 241230
Effective search space used: 241230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
