Query= MSMg01no305_l11.b1 MSMg01no305_l11.b1 CHROMAT_FILE:
MSMg01no305_l11.b1 PHD_FILE: MSMg01no305_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:00 2005
(423 letters)
>mm_chr9_63516252_63517075
Length = 824
Score = 739 bits (382), Expect = 0.0
Identities = 403/410 (98%), Gaps = 1/410 (0%)
Strand = Plus / Plus
Query: 15 gaattc-acagattttatgagtactttataagagaggggctggccagatgtgtcaaccag 73
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 215 gaattcaacagattttatgagtactttataatagaggggctggccagatgtgtcaaccag 274
Query: 74 agccaaccagggtccaaataatctccaagctactggcttggaatagggagggacaaaggt 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agccaaccagggtccaaataatctccaagctactggcttggaatagggagggacaaaggt 334
Query: 134 cagtgctaggcctggtcacagggactgagagctgctgactaaggacttgtggaaggatgt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cagtgctaggcctggtcacagggactgagagctgctgactaaggacttgtggaaggatgt 394
Query: 194 aattacctccctcccatgaggcccagaccaaggagcccctacagctgaaaacagtaatta 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aattacctccctcccatgaggcccagaccaaggagcccctacagctgaaaacagtaatta 454
Query: 254 cagagctgaacaagagaggacagcctgaaactagcccttgaggcacaggaggaaggcagc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cagagctgaacaagagaggacagcctgaaactagcccttgaggcacaggaggaaggcagc 514
Query: 314 cagatgtgaaatcctaagacctgaagatgctactgactatgcaagcctgggtactattat 373
||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
Sbjct: 515 cagatgtgaaatcctaagacctgaagatgctcctgactatgcaagcctgggcactaggac 574
Query: 374 cctcaactgccccatgtgtaagatggggacagtctcccctcacctgatct 423
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cctcaactgccccatgtgtaagatggggacagtctcccctcacctgatct 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_l11.g1 MSMg01no305_l11.g1 CHROMAT_FILE:
MSMg01no305_l11.g1 PHD_FILE: MSMg01no305_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:00 2005
(399 letters)
>mm_chr9_63678319_63679117
Length = 799
Score = 518 bits (268), Expect = e-151
Identities = 295/308 (95%), Gaps = 8/308 (2%)
Strand = Plus / Minus
Query: 1 actctttctgtgacattggcttgcctgtcatttcccccgacacctcagtgccaaatactt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 483 actctttctgtgacattggcttggctgtcatttcccccgacacctcagtgccaaatactt 424
Query: 61 tcctgatcgatagctatgttatctgaagtatgggccttcccttgtactaggtctctgcc- 119
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tcctgattgatagctatgttatctgaagtatgggccttcccttgtactaggtctctgcca 364
Query: 120 ---ccttgggagaggcacagaaggaaggaagtcttaggccaggtactttgatggtggaaa 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 agg----gggagaggcacagaaggaaggaagtcttaggccaggtactttgatggtggaaa 308
Query: 177 ctagatgttaccggggtaggtggttgttggctctgagcacggggattaaagcgtgtactt 236
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 307 ctagatgttaccggggtaggtggttgctggctctgagcacggggattaaagcgtgtactt 248
Query: 237 ccatgcctggatgcttctgttctaatgtttggaaagatttattacttagtgtgtgtgtgt 296
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 247 ccatgcctggatgcttctgttctaatgtttagaaagatttattactttgtgtgtgtgtgt 188
Query: 297 gtgtgtgt 304
||||||||
Sbjct: 187 gtgtgtgt 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
