TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTCTTTTGTTCATGGCTAGCCATGGTCAAAAGGGACCGAGATCT
GTGGGAATTGTCTGCTCTCAGGGGCAGCAAGGGCAAGATAACTTTGGTAG
CTGGAACCTTTCCCAGCCCCAATTAACCTTGTATGATGTTTGAATAAAGT
AACTGCAGTGAGCTAGCCGGGGGTCAGCCTTTTCCAAGAAGGCTGAACCC
CTCTGCTTCTTCAGAAAATGGAGCCTTAGCATCTTGGTGAGGTTCTTTCT
CTACTGTAGCACCTTCGGGCATCAATCAATAACTAGGTTTCGTCACAAAT
ACACCAGACCGTGGCTTTCTCTGCTGCCTTAACAGTGCCTGGTCTCTGTT
GGTCTTGTTCCTAATTTCATCCCATGCTCACCTGAGCTCACTGCTACCCC
AAACTGGCTGAAAGTGCTTCTTTGCTCCAAATCCCCATGATTAGCTGTAA
AGTTGTACTGAGCGCTTGATAGCAGCAGAGGGTAAAAGAGGCCCATCTGT
AGTCAGGACAACTTCATCCCAGCCAGCTAAAAGTAATCCGGAAGGGAAGG
CCTCTTGCAACAACTCTCAAATATAGTGCGCCTAGAACCCAGGTATCTCT
TTAGAAACAGATTCTAATTCAGTAGCTGTGGGACGTGGGAGCAGTGGACA
TTGCTCACAAGGTCCCAGGTAAGAGCCAGGAAGAAGGCACAACCCGTAAA
N

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTAAAATTGTTTAACCGGGAAGATG
TTTTTCAGAAACCCCTGGTGCCTTGCACCTTGTTTTTCTGTTTATTTCAT
ATTGTTTTTCTCCCTGTTTTTTTTTTAATTATCCCTGGAAGGGCTCAAGA
GTCCTCCCTTGCACTCTAAATAGTTAAGAGTATTAGTGTGTTGTGCTGTG
GTCACTTCAGCTAGGGGGAATCTCTGGGAAGGAGGTTCCCAGGACTGGCA
GAGAAGGGCAGTGGTGTCCCCTGAGTGCCCAGACAAGGGCATGAGGCTGG
AGGTGGGGGTTTCTTTCATGTCCATACCCTTAGCTTTTCAGTTAGAACAT
CAGGCAGGGTAGAAGCCCAAATGCACACCCAGCCTTCAGCCTGCACGAGA
ACCAGAAGTCGTGCCTTCCCTGCTTGTGGGTGAACCCTGTTGCAGAGAGG
GTGTAGGTAGAGAGTTTATACCCAATTTTAATAATATTTTTTCTGCTCTT
GCTGTTGCACTTGGCAGACTCCCTTTTTAACATTTGGTAATGTGTCTTCG
CTAATGCTAGAAAGAAAAGTCACCAAATATAGCTGTTGGGAAAAGTAATA
TTAAGACATTTCTTTGGGTGTGGCTGCACACTTGCAAGAGTGCATGGATT
CCCTGCAAGGTGACCTGAAGGCTGCTGCCACACTCAAGCTGGAGGGGCAN

Query= MSMg01no306_a13.g1 MSMg01no306_a13.g1 CHROMAT_FILE:
MSMg01no306_a13.g1 PHD_FILE: MSMg01no306_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:41 2005
         (672 letters)



>mm_chr9_69979200_69980271
          Length = 1072

 Score = 1222 bits (632), Expect = 0.0
 Identities = 664/678 (97%), Gaps = 7/678 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaaaattgtttaaccgggaagatgtttttcagaaacccctggtgccttgcaccttgttt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 968 ttaaaattgtttaaccgggaagatgtttttcagaaacccctggtgccttg-agcttgttt 910

                                                                       
Query: 61  ttctgtttatttcatattgtttttctccctg------ttttttttttaattatccctgga 114
           |||||||||||||||||||||||||||||||      ||||||||||||||| |||||||
Sbjct: 909 ttctgtttatttcatattgtttttctccctgttttttttttttttttaattagccctgga 850

                                                                       
Query: 115 agggctcaagagtcctcccttgcactctaaatagttaagagtattagtgtgttgtgctgt 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 agggctcaagagtcctcccttgcactctaaatagttaagagtattagtgtgttgtgctgt 790

                                                                       
Query: 175 ggtcacttcagctagggggaatctctgggaaggaggttcccaggactggcagagaagggc 234
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 789 ggtcacttcagctagggggaatctctgggaaggaggttcccaggaccggcagagaagggc 730

                                                                       
Query: 235 agtggtgtcccctgagtgcccagacaagggcatgaggctggaggtgggggtttctttcat 294
           ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 729 agttgtgtcccctgagtgcccagacaagggcatgaggctggaggtaggggtttctttcaa 670

                                                                       
Query: 295 gtccatacccttagcttttcagttagaacatcaggcagggtagaagcccaaatgcacacc 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gtccatacccttagcttttcagttagaacatcaggcagggtagaagcccaaatgcacacc 610

                                                                       
Query: 355 cagccttcagcctgcacgagaaccagaagtcgtgccttccctgcttgtgggtgaaccctg 414
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cagccttcagcctgcacgagagccagaagtcgtgccttccctgcttgtgggtgaaccctg 550

                                                                       
Query: 415 ttgcagagagggtgtaggtagagagtttatacccaattttaataatattttttctgctct 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttgcagagagggtgtaggtagagagtttatacccaattttaataatattttttctgctct 490

                                                                       
Query: 475 tgctgttgcacttggcagactccctttttaacatttggtaatgtgtcttcgctaatgcta 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgctgttgcacttggcagactccctttttaacatttggtaatgtgtcttcgctaatgcta 430

                                                                       
Query: 535 gaaagaaaagtcaccaaatatagctgttgggaaaagtaatattaagacatttctttgggt 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gaaagaaaagtcaccaaatatagctgttgggaaaagtaatattaagacatttctttgggt 370

                                                                       
Query: 595 gtggctgcacacttgcaagagtgcatggattccctgcaaggtgacctgaaggctgctgcc 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtggctgcacacttgcaagagtgcatggattccctgcaaggtgacctgaaggctgctgcc 310

                             
Query: 655 acactcaagctggagggg 672
           ||||||||||||||||||
Sbjct: 309 acactcaagctggagggg 292


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)