Query= MSMg01no307_k17.b1 MSMg01no307_k17.b1 CHROMAT_FILE:
MSMg01no307_k17.b1 PHD_FILE: MSMg01no307_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:47 2005
(371 letters)
>mm_chr9_98728142_98728913
Length = 772
Score = 671 bits (347), Expect = 0.0
Identities = 364/371 (98%), Gaps = 5/371 (1%)
Strand = Plus / Minus
Query: 4 gaattcttctctcc--tccacactctttgtaagcatcagcctttataactccagctttga 61
|||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 572 gaattcttctctcctttc--cactctttgtaagcatcagtctttataactccagctttga 515
Query: 62 ggaccctaggttccctagacaacacttggcctggccaaaatgtggcagtctccggttcca 121
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaccctaggttccccagacaacacttggcctggccaaaatgtggcagtctccggttcca 455
Query: 122 tttagcttggctggggtaatgtttatatttttcccttaaaggccatttataggacaaaac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tttagcttggctggggtaatgtttatatttttcccttaaaggccatttataggacaaaac 395
Query: 182 taacaataaacactctcattaacattaaaaaaaagaaatctcaaaactttgcaacaagag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 taacaataaacactctcattaacattaaaaaaaagaaatctcaaaactttgcaacaagag 335
Query: 242 tttccagaatgtgattttttttt-ccccttcacaaaattatactctgattagcatctatt 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 334 tttccagaatgtgattttttttttccccttcacaaaattatactctgattagcatctatt 275
Query: 301 gacttcatgttcctggctgttacttggttcatggacgaatcccaaaggttctcgcccttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gacttcatgttcctggctgttacttggttcatggacgaatcccaaaggttctcgcccttg 215
Query: 361 ggaatccccag 371
|||||||||||
Sbjct: 214 ggaatccccag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 772
Length adjustment: 9
Effective length of query: 362
Effective length of database: 763
Effective search space: 276206
Effective search space used: 276206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_k17.g1 MSMg01no307_k17.g1 CHROMAT_FILE:
MSMg01no307_k17.g1 PHD_FILE: MSMg01no307_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:47 2005
(281 letters)
>mm_chr9_98546158_98546838
Length = 681
Score = 536 bits (277), Expect = e-157
Identities = 280/281 (99%)
Strand = Plus / Plus
Query: 1 agacttacatctggcatccaacagggggcaccagagactgctcaggctggtgaacactgc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 agacttacatctggcatccaacagggggcaccagagactgctcaggatggtgaacactgc 260
Query: 61 agctagaaagcagagaggactctggcaccctgagctctgcagatggaagatcacaaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctagaaagcagagaggactctggcaccctgagctctgcagatggaagatcacaaaact 320
Query: 121 ttaacaacgagcccctttactccttattatcccttcaagtggaataaaactcactcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaacaacgagcccctttactccttattatcccttcaagtggaataaaactcactcttaa 380
Query: 181 atacccagagtgcaccttcttcactccaggataagaatgttgtaacagttgctaaactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacccagagtgcaccttcttcactccaggataagaatgttgtaacagttgctaaactct 440
Query: 241 ctgcttgcctctgcaaagagatagactagtagtactgccat 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgcttgcctctgcaaagagatagactagtagtactgccat 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|