TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTTTGTGTTGAACAGCTATTCCTCCTAAGCACAAGTGCTGCCCT
GGCATGTGGTGACATACCCCGTGTCAGTCTAAAGTTGATCTGGGGACTCG
AGAGCTGGCTCCACAGTTAAGATCATTTGCTTCTCTTGCAGAGGACCCAG
GTTGGATTCCTAGAAACTGAAATGGCTCGGAACTATCCTTAACTCCAGGT
CTAGGGTATCTAACAACAGCTTCTGATCTTCACAGGCACCATGCACACAT
GTGGTGCACGTATATATGTGCAGGCAAAACATTCATACACGTAAAATAAA
ATGTAAACATTGAGAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTAAAGAAAGCTGTCCCAACAGCTATCAATTCCACATAGTTCCTTT
GTTAGGATGTATGTTTGTATCTACCCTTCTCTGTACCTACATTCACTTCC
TTACATTTTTCTAAGTTTAATCACTTACCATCCCCACTGTATCTAAAGTA
TCTGTTCCAACTGTCTCTCCTTCTTTACCCTTCCGTTGTATTTCCTGTAC
AGCAGTGTTACCCCCCTTTACTTTCCCCCAACCAGTCTATTCCCCCCTTA
ATTCCCTCCATTATTGTA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTGATACCCAGGAGGTTGAGGCAG
GAAGACCAGGACTTCAATGTCATCTGCTAGAGTAAGTTCCAGGCTAGCCC
AGGGTATGTAAGAGTTCCAGGCTAGCCCAGGGTATGTAAGACTGTCTCAA
AACACCATAACTCAAGAAAATGAAAATCAAGACAATAAACTCTAAGACAA
AACTCCAGAACATGAAAAGCAATGCAGACATTAGCTCTAAGAACAGAACT
TCTTTAAGAAAGGAGGCAGTAGCAAATCACTGGGCACAGGAGTGAGAACT
TGGAAGGCAAAACAAAACAAAAGGTCAATGTCCACATAGGCAAGTGTTGA
TTGTCACGGATTGTAGGGACTGCTGGAAAGGATAGGGACAGGCACAGGGG
AAGGCACGTCCTCAGTGGTGTCAATAAACACAAGGCTCGTAGCTAACAAA
AGAGCAGTTTAAAAAAATACTTAAAATATCTCTCCATCCCACTCAAACAA
ACCTTCCGAACATCAGAGCTTTTGGGCTCTGTTGTCCAAGTGATGACCCG
AGACACTGCCAGGCGAGTTTCACTGGAATTTGTAAAATCTCTTGGGTCCA
TCTGCTTTGCCAGAGTTTCTATGTACTTAAGGATAGCCACCTTTACCTGT
TGAAGAAGGCACAATANAAGAGGAGAGTGAGAAGGACACTTG

Query= MSMg01no309_g19.g1 MSMg01no309_g19.g1 CHROMAT_FILE:
MSMg01no309_g19.g1 PHD_FILE: MSMg01no309_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:00 2005
         (666 letters)



>mm_chr9_113805388_113806454
          Length = 1067

 Score = 1268 bits (656), Expect = 0.0
 Identities = 664/667 (99%), Gaps = 1/667 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgatacccaggaggttgaggcaggaagaccaggacttcaatgtcatctgctagagtaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 ttgatacccaggaggttgaggcaggaagaccaggacttcaatgtcatctgctagagtaag 934

                                                                       
Query: 61  ttccaggctagcccagggtatgtaagagttccaggctagcccagggtatgtaagactgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 ttccaggctagcccagggtatgtaagagttccaggctagcccagggtatgtaagactgtc 874

                                                                       
Query: 121 tcaaaacaccataactcaagaaaatgaaaatcaagacaataaactctaagacaaaactcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 tcaaaacaccataactcaagaaaatgaaaatcaagacaataaactctaagacaaaactcc 814

                                                                       
Query: 181 agaacatgaaaagcaatgcagacattagctctaagaacagaacttctttaagaaaggagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 agaacatgaaaagcaatgcagacattagctctaagaacagaacttctttaagaaaggagg 754

                                                                       
Query: 241 cag-tagcaaatcactgggcacaggagtgagaacttggaaggcaaaacaaaacaaaaggt 299
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 cagttagcaaatcactgggcacaggagtgagaacttggaaggcaaaacaaaacaaaaggt 694

                                                                       
Query: 300 caatgtccacataggcaagtgttgattgtcacggattgtagggactgctggaaaggatag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 caatgtccacataggcaagtgttgattgtcacggattgtagggactgctggaaaggatag 634

                                                                       
Query: 360 ggacaggcacaggggaaggcacgtcctcagtggtgtcaataaacacaaggctcgtagcta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ggacaggcacaggggaaggcacgtcctcagtggtgtcaataaacacaaggctcgtagcta 574

                                                                       
Query: 420 acaaaagagcagtttaaaaaaatacttaaaatatctctccatcccactcaaacaaacctt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 acaaaagagcagtttaaaaaaatacttaaaatatctctccatcccactcaaacaaacctt 514

                                                                       
Query: 480 ccgaacatcagagcttttgggctctgttgtccaagtgatgacccgagacactgccaggcg 539
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 513 ccgaacatcagagcttttgggctctgtcgtccaagtgatgacccgagacactgccaggcg 454

                                                                       
Query: 540 agtttcactggaatttgtaaaatctcttgggtccatctgctttgccagagtttctatgta 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agtttcactggaatttgtaaaatctcttgggtccatctgctttgccagagtttctatgta 394

                                                                       
Query: 600 cttaaggatagccacctttacctgttgaagaaggcacaatanaagaggagagtgagaagg 659
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 393 cttaaggatagccacctttacctgttgaagaaggcacaataaaagaggagagtgagaagg 334

                  
Query: 660 acacttg 666
           |||||||
Sbjct: 333 acacttg 327


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1067
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1057
Effective search space:   693392
Effective search space used:   693392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)