Query= MSMg01no309_i01.b1 MSMg01no309_i01.b1 CHROMAT_FILE:
MSMg01no309_i01.b1 PHD_FILE: MSMg01no309_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:06 2005
(321 letters)
>mm_chr6_110782412_110783132
Length = 721
Score = 540 bits (279), Expect = e-158
Identities = 302/317 (95%), Gaps = 13/317 (4%)
Strand = Plus / Plus
Query: 5 gaattccttgtaaataaggcatatgtgtcaccataatgtgggtgtcacactcattcatga 64
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 205 gaattccttgtaaataaggcatatgtgtcaccataatgtgggtatcccactcattcatga 264
Query: 65 tttttttttctcatccgattatggtcctatgtcatcaagtattaattaaacacaaacttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttttttttctcatccgattatggtcctatgtcatcaagtattaattaaacacaaacttc 324
Query: 125 attcattcccagctggtgacaacagttttttttctttttctttttctttttctttttctt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attcattcccagctggtgacaacagttttttttctttttctttttctttttcttttt--- 381
Query: 185 ttttcttttttctgttttctgtttttcctattgtcccagatatctacacttgtattgtct 244
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 382 ---tcttttttctgtttt-------tcctattgtcccagatatctacacttgtattgtct 431
Query: 245 agcactttctccttgaaccagttttgatcataaacattgttctggccatgctctgtgctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 agcactttctccttgaaccagttttgatcataaacattgttctggccatgctctgtgctc 491
Query: 305 tgtggcttatttatgtt 321
|||||||||||||||||
Sbjct: 492 tgtggcttatttatgtt 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_i01.g1 MSMg01no309_i01.g1 CHROMAT_FILE:
MSMg01no309_i01.g1 PHD_FILE: MSMg01no309_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:06 2005
(445 letters)
>mm_chr9_20444969_20445813
Length = 845
Score = 563 bits (291), Expect = e-164
Identities = 312/323 (96%), Gaps = 8/323 (2%)
Strand = Plus / Minus
Query: 127 gctcagacctcagtttctcatctaagatatggggattaaaaataatgcttgtaggccagg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gctcagacctcagtttctcatctaagatatggggattaaaaataatgcttgtaggccagg 786
Query: 187 cagtggtggcgcaggcctttaatcccatcccttgggaggcagaggcaggcggatttctga 246
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 785 cagtggtggcgcaggcctttaatcccatcccttgggaggcagaggcaggcagatttctga 726
Query: 247 gttcgaggccagcctggtctacagagtgagttccaggacagccagggctacacagagaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gttcgaggccagcctggtctacagagtgagttccaggacagccagggctacacagagaaa 666
Query: 307 ccctgtctggaaaaacaaaaaaaagtacctttatgtttc----ccccctgatgtattgta 362
||||||||||||||||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 665 ccctgtctggaaaaacaaaaaaaagtaccttcatgtttcatgtc----tgatgtattgta 610
Query: 363 taacttagccagtatggccagtgtgtgtctccagcatttaataaatgcaagcttatagct 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gaacttagccagtatggccagtgtgtgtctccagcatttaataaatgcaagcttatagct 550
Query: 423 tttcagttttctagttttgttgt 445
|||||||||||||||||||||||
Sbjct: 549 tttcagttttctagttttgttgt 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
