Query= MSMg01no312_i03.b1 MSMg01no312_i03.b1 CHROMAT_FILE:
MSMg01no312_i03.b1 PHD_FILE: MSMg01no312_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:36 2005
(239 letters)
>mm_chr9_18154049_18154689
Length = 641
Score = 443 bits (229), Expect = e-129
Identities = 233/235 (99%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 4 catcaccatacataacttcatctatgttcttacagaagtta--cgtgctattgaatataa 61
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 204 catcaccatacataacttcatctatgttcttacagaagttagacgtgctattgaatataa 263
Query: 62 taacacctcttatagaaaactaggaagaatgttgcaatgatttctaaatccatacgttta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taacacctcttatagaaaactaggaagaatgttgcaatgatttctaaatccatacgttta 323
Query: 122 tcaatgcaaatttactaacataaatcttagatgtctttgattattattttaaatttctga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcaatgcaaatttactaacataaatcttagatgtctttgattattattttaaatttctga 383
Query: 182 aatcaaaggaacaaacatttctgtacatgtatattacaataagtcacacattcta 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatcaaaggaacaaacatttctgtacatgtatattacaataagtcacacattcta 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 641
Length adjustment: 9
Effective length of query: 230
Effective length of database: 632
Effective search space: 145360
Effective search space used: 145360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no312_i03.g1 MSMg01no312_i03.g1 CHROMAT_FILE:
MSMg01no312_i03.g1 PHD_FILE: MSMg01no312_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:36 2005
(247 letters)
>mm_chr9_18331727_18332372
Length = 646
Score = 433 bits (224), Expect = e-126
Identities = 239/244 (97%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 tctaattagagccatgcgacaatttttaatgaatgtgatgatggatacacaagtgtgtgt 60
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 443 tctatttagagccatgcgacaatttttaatgaatgtgatgatggataaacaagtgtgtgt 384
Query: 61 gtgtctgtgtgtctgtgtgcatgattcaataagcacattatagaatagatatatgaatgg 120
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 383 gtatctgtgtgtctgtgtgcatgattcaataagcacattataggatagatatatgaatgg 324
Query: 121 gtagatgaaagtattgaatagatggataggtatatactatgagcagataggcactgtatg 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 323 gtagatgaaagtattgaatagatggataggtatata-tatgagcagataggcactgtatg 265
Query: 181 catggatacatgaatggattggtatgtgaattcacaataaacaaaggtaaaaatgaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catggatacatgaatggattggtatgtgaattcacaataaacaaaggtaaaaatgaatat 205
Query: 241 tagg 244
||||
Sbjct: 204 tagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 646
Length adjustment: 9
Effective length of query: 238
Effective length of database: 637
Effective search space: 151606
Effective search space used: 151606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
