Query= MSMg01no315_a07.b1 MSMg01no315_a07.b1 CHROMAT_FILE:
MSMg01no315_a07.b1 PHD_FILE: MSMg01no315_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:22 2005
(372 letters)
>mm_chr9_79065729_79066503
Length = 775
Score = 648 bits (335), Expect = 0.0
Identities = 359/371 (96%), Gaps = 9/371 (2%)
Strand = Plus / Minus
Query: 5 gaattcaatattccctaagtatgtagtaggccatgccatccagcatcatgtgtgtgtatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaattcaatattccctaagtatgtagtaggccatgccatccagcatcatgtgtgtgtatt 398
Query: 65 ctatgatgaccatacagcacacacaaaatcacctagtgatgcatttatcagaagatgccc 124
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 397 ctatgatgaccatatagcacacacaaaatcacctaatgatgcatttatcagaagatgccc 338
Query: 125 attactaaatgattcatgatctatcactaaatgctc-c-----atgatgatacatatact 178
||||||||||||||||||||||||||||||| || | |||||||||||||||||
Sbjct: 337 attactaaatgattcatgatctatcactaaa---tcactaaatatgatgatacatatact 281
Query: 179 acatggtttccagctgctgagattaaagagaagctagccaatgcagtttcaagaggagga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 acatggtttccagctgctgagattaaagagaagctagccaatgcagtttcaagaggagga 221
Query: 239 tttctgccatgatctctgtgttggcttgttttatgtcaggctgaaacaagctgaagtcat 298
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 220 tttctgccatgatctctgtgttggcttgttttatgtcaggttgaaacaagctgaagtcat 161
Query: 299 aggataggtgggaacctcagtggagaaaatgctttcataatatctggtaggcaggcctgt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aggataggtgggaacctcagtggagaaaatgctttcataatatctggtaggcaggcctgt 101
Query: 359 agggcattttc 369
|||||||||||
Sbjct: 100 agggcattttc 90
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 775
Length adjustment: 9
Effective length of query: 363
Effective length of database: 766
Effective search space: 278058
Effective search space used: 278058
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_a07.g1 MSMg01no315_a07.g1 CHROMAT_FILE:
MSMg01no315_a07.g1 PHD_FILE: MSMg01no315_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:22 2005
(630 letters)
>mm_chr9_78903531_78904560
Length = 1030
Score = 1166 bits (603), Expect = 0.0
Identities = 623/635 (98%), Gaps = 10/635 (1%)
Strand = Plus / Plus
Query: 1 caggatacaataaaaagaccaagctaaaggataataggtatagaggagagtgaagattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggatacaataaaaagaccaagctaaaggataataggtatagaggagagtgaagattcc 260
Query: 61 caacttaaagggccagtaaatatcttcaacaaaattataaaagaaaacttctctaaccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacttaaagggccagtaaatatcttcaacaaaattataaaagaaaacttctctaaccaa 320
Query: 121 aagaaagagatgcccatgaacatacaagaagtctacagaactccaattagattggaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaaagagatgcccatgaacatacaagaagtctacagaactccaattagattggaccag 380
Query: 181 aaaataaattcctcctgccacataatagtggtggcatccctgggcaggtagtcctgggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaataaattcctcctgccacataatagtggtggcatccctgggcaggtagtcctgggtt 440
Query: 241 ctataagaaagcaagctgaacaagccaggggaagcaagccagtaaagaacatccctccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctataagaaagcaagctgaacaagccaggggaagcaagccagtaaagaacatccctccat 500
Query: 301 agcctctgcatcagctcctgctcctgacttgctccagtcccgcccccca-----agctga 355
|||||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct: 501 agcctctgcatcagctcctgctcctgacttgctccagtcctgc-----agtgtaagctga 555
Query: 356 ataaaccctttccaccccttgctttttggtcaagatgttttgtgcaggaatacaaacatt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ataaaccctttccaccccttgctttttggtcaagatgttttgtgcaggaatacaaacatt 615
Query: 416 gactaagacagtgatgatgtaaagtaaaaagatccataggtttgtagtcgtgaatgtgaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gactaagacagtgatgatgtaaagtaaaaagatccataggtttgtagtcgtgaatgtgaa 675
Query: 476 taactgactaaataaagtggaacaagcgcaaatatcttatagaaagattaaaaataatgt 535
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 676 taactgactaaataaagtggaacaagtgcaaatatcttatagaaagattaaaaataatgt 735
Query: 536 atgtttatagcatatgatctccaatagaacctgagagcaaacttcactccttagtttaaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 atgtttatagcatatgatctccaatagaacctgagagcaaacttcactccttagtttaaa 795
Query: 596 tgttcaatggacattaatttatttctgaagaatag 630
|||||||||||||||||||||||||||||||||||
Sbjct: 796 tgttcaatggacattaatttatttctgaagaatag 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
