TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTGCACTATTACCATCTGGCTCTGGGCTATTTTTGGTTGGGAGTGTTTTA
ATGACTGCTTCTATTTCCGTAGGGTTAATGGCACTGTTTAGATAGCTTAC
CTGATCTTGGTTTAACTTTGGTATGTGGTGTCTGTCTAGAAAATCATCTA
TTTCATCTAGATTTTCCAGTTTTGTCCAGTACAGGCTGTTGTGGTAAGAT
CCGATGATTTTTTTTTTTTAATTCCCATCCTTTGTTATGTCTCCCTTTTC
ATTTCTGATTTTATTTTGGTTACTGTCTTTGTGACCTTTAGTTAGTTTGG
TTAAGAGCTTATCTCTGTTGATTTCCTCAAAGATCCAGTTCTTGGCTTTG
TAACAATTCTTTGTATCATTCTCTTTGTTGATCTTTGAGTTTGACTATTT
CCTACCCTCTTCTTATCTTGGGTATGTTTGCCTCATTTTATTTTTGAGCT
TTCCTGTGTGATGTTAAGTTGCTAATGTAGGATCTCTCCAATTTCTTTCC
TTTTTTAGGAATGGAAACTGTCTCAAGTACTGTTTATTATGTCTGCAATG
AGAAATCCTCCACATTTCTCTGTATAATTTTAAGTTCTCCACAACTAGAT
TCATCTCTCTCTTTCTTTTTTAAATTGGATATTTTATTTATTTACATTTC
AAATGTTATCCCCATTTCCGGTTTCCCCTCA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAACAGAGGACTCTTGAATGGCT
GAGAAGCACCTAAAGAAATGTTCAAAGTCCTTAGTGATCAGGGAAATGCA
AATCAAAATGACCCTGAGATTCCACCTTACACCAATCAGAATGGCTAAGA
TCAAAACCTCAGGTGACAACACATGTTGGAGAGGATGTGGAGAAAGAGGA
ACATTCTTCCATTGCTGGTGGGATTGTAAACTGGTACAACAACTCAGGAA
ATCAATACGGAGGTTCCTCAGAAAATTGGAAGACTACCTGAAGACCCAGC
TATACAACTCTTGGGCATATAGCCAAAAGATGCCCTGCCATGCCACAGGG
GCATGTGTTCCACTCTGTTCATAGCGGCCTTATTTGTGATAGCCAGAAAC
TGGAAACAACCTAGATGTCCCATGACAGAAGAATGGATAAAGAAAATGTG
GTTCATTTACACAATGGAATACTACTCAGCTTTTAAGAATGAGGCTATCC
TGAGTTTTGCAGGCAAAAAATGGATGGAACTAGAAAATATCATCCCTAGT
GAGGAAACTCAGACCCAAAAGGACATGCATGGCATGTACGCACTAATAAG
TGGGTATTAGTTAAAAAAAAAAAAAAAAAGAAAAAAAGTAGAGAATATCC
AAGATACAGTCCACAGAACTCAAAAAGGTCAACAAGTTGGA

Query= MSMg01no316_j13.b1 MSMg01no316_j13.b1 CHROMAT_FILE:
MSMg01no316_j13.b1 PHD_FILE: MSMg01no316_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:23 2005
         (688 letters)



>mm_chr9_100623875_100624962
          Length = 1088

 Score = 1297 bits (671), Expect = 0.0
 Identities = 682/687 (99%), Gaps = 3/687 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgcactattaccatctggctctgggctatttttggttgggagtgttttaatgac 64
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattctgcactaaaaccatctggctctgggctatttttggttgggagtgttttaatgac 261

                                                                       
Query: 65  tgcttctatttccgtagggttaatggcactgtttagatagcttacctgatcttggtttaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgcttctatttccgtagggttaatggcactgtttagatagcttacctgatcttggtttaa 321

                                                                       
Query: 125 ctttggtatgtggtgtctgtctagaaaatcatctatttcatctagattttccagttttgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctttggtatgtggtgtctgtctagaaaatcatctatttcatctagattttccagttttgt 381

                                                                       
Query: 185 ccagtacaggctgttgtggtaagatccgatga---ttttttttttttaattcccatcctt 241
           ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 382 ccagtacaggctgttgtggtaagatccgatgatttttttttttttttaattcccatcctt 441

                                                                       
Query: 242 tgttatgtctcccttttcatttctgattttattttggttactgtctttgtgacctttagt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgttatgtctcccttttcatttctgattttattttggttactgtctttgtgacctttagt 501

                                                                       
Query: 302 tagtttggttaagagcttatctctgttgatttcctcaaagatccagttcttggctttgta 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tagtttggttaagagcttatctctgttgatttcctcaaagatccagttcttggctttgta 561

                                                                       
Query: 362 acaattctttgtatcattctctttgttgatctttgagtttgactatttcctaccctcttc 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acaattctttgtatcattctctttgttgatctttgagtttgactatttcctaccctcttc 621

                                                                       
Query: 422 ttatcttgggtatgtttgcctcattttatttttgagctttcctgtgtgatgttaagttgc 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttatcttgggtatgtttgcctcattttatttttgagctttcctgtgtgatgttaagttgc 681

                                                                       
Query: 482 taatgtaggatctctccaatttctttccttttttaggaatggaaactgtctcaagtactg 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 taatgtaggatctctccaatttctttccttttttaggaatggaaactgtctcaagtactg 741

                                                                       
Query: 542 tttattatgtctgcaatgagaaatcctccacatttctctgtataattttaagttctccac 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tttattatgtctgcaatgagaaatcctccacatttctctgtataattttaagttctccac 801

                                                                       
Query: 602 aactagattcatctctctctttcttttttaaattggatattttatttatttacatttcaa 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aactagattcatctctctctttcttttttaaattggatattttatttatttacatttcaa 861

                                      
Query: 662 atgttatccccatttccggtttcccct 688
           |||||||||||||||||||||||||||
Sbjct: 862 atgttatccccatttccggtttcccct 888


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space:   730884
Effective search space used:   730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)