XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAACCGCGGAATTC
AGCGCCTTTGCCCCAACACCTGAGATGTGGGGAGGTTGAGCTTAAACTGG
GTGTGCTAGTTGGATCTGGTCATCAAGCGAGCATTTCTCCCCCAGAAACA
CCATTCCCTGAAACTCACTGAGATGTGCTACCTTGCACACAGCCAAAGCA
ACGACCAGGGAGTTGCCAGCAGAAACTTCTACAACTGAGGCACATAAACC
TTGTTTTCCTTTCTAAGTTCATGGTCTCCCGTGCTCCTTACGGACTCGGG
AGGCAGCCTATCACCATCGTTTCCTTCTTCCAGCTCTGCCCGCTGAAGGA
TCTGTCATCACTGAAAACCCTGTTTTTTTGTTCCCTGCAGCTCACAGTCA
CGAAGCCACACCGAACATCTTGAAACTCCCGAGGTTTCAAATGCACATTT
TCCTTATGAGGATGAGAGACTTTGCTTAAAAAAAAAAAAAACTTTTGAAA
TCAATGAAATGTGCGGTACAGTGCACAGTTGACCACATATACTCCTGATG
CCAGACTGCTTTCTGACTGGTGGACGCCTAAGCACTCAAATACACCCCAA
TACGCGTTTAATCCTCGAACTTCATTGTGCTCTAAGAAAATCCAAAGTAA
TAAAGTATTTGCTATGCTCCAGTGAGAACCGTTACATAGTGAGCGCCCTA
CAGCCAAGAAGCTTGCTGCTTCTCG

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCGGTACCCCCCTGGGAGTTCTTCAAA
CGCCTCTTGAGTGTTGAAAACGCGTCTCCTTCAGGTTTGCTAGCGTCATC
AAGGAAGAGGCCATTTACAGGCCTTAGTCTAAAGCTCAGCATCCGTGGCC
TGGCCAGTTCCTAGGAAGCTGATGTTTTAACTCTAGGGATGAAGAGCAGA
GCAACTACCCACAGCTCTCCCAGGAAATGATGCGAAGTTGGTGGTATTAA
ATATGCACTGGACAAGAAAGCGCTCCAGGTGAACCCATGCACGGTGGTGG
TCAGAGACCCAAGGCTTTTTGCGCGTGTGGACTGACACTATTCTGCGGGA
TCGTGTGGTTNCCCAACAACCCCTGGAAAGGAAAGCACAGACCTTTTCTG
GAATTTACAGTTTGTGGTTTTTTTTTTTTCAGTTAATATATTCTGGGTCC
TTTCCATACCTGTGCACGGAAAGACTCCCCAGAATTTCTGTAAGCTTCTA
TTTACTAGCTTCAGCTCCTATTTACCTGTGTCGGCGAGAGTTTGTCCGCA
GATTCCTCTTTTTCCCATTTCCTTTATCCCCTCCCTGTTATTCCCGTTTT
TTCTTCATTCTTTTTCCTTACCCTTATTTCTTTCCCCCCTCTCCTTCCCT
TTTTTGTCTTCTTCTCTTTTTTCCCTCCCTCTACCTTG

Query= MSMg01no318_c09.b1 MSMg01no318_c09.b1 CHROMAT_FILE:
MSMg01no318_c09.b1 PHD_FILE: MSMg01no318_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:16 2005
         (370 letters)



>mm_chr9_98147279_98148048
          Length = 770

 Score =  650 bits (336), Expect = 0.0
 Identities = 357/364 (98%)
 Strand = Plus / Plus

                                                                       
Query: 7   ttcagcgcctttgccccaacacctgagatgtggggaggttgagcttaaactgggtgtgct 66
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttcagcgcctttgggccaacacctgagatgtggggaggttgagcttaaactgggtgtgct 266

                                                                       
Query: 67  agttggatctggtcatcaagcgagcatttctcccccagaaacaccattccctgaaactca 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agttggatctggtcatcaagcgagcatttctcccccagaaacaccattccctgaaactca 326

                                                                       
Query: 127 ctgagatgtgctaccttgcacacagccaaagcaacgaccagggagttgccagcagaaact 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgagatgtgctaccttgcacacagccaaagcaacgaccagggagttgccagcagaaact 386

                                                                       
Query: 187 tctacaactgaggcacataaaccttgttttcctttctaagttcatggtctcccgtgctcc 246
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tctacagctgaggcacataaaccttgttttcctttctaagttcatggtctcccgtgctcc 446

                                                                       
Query: 247 ttacggactcgggaggcagcctatcaccatcgtttccttcttccagctctgcccgctgaa 306
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 447 ttacagactcgggaggcagcctatcaccatcgtttccttcttccagctctgcccactgaa 506

                                                                       
Query: 307 ggatctgtcatcactgaaaaccctgtttttttgttccctgcagctcacagtcacgaagcc 366
           ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 507 ggatctgtcatcactgaaaaccccgttcttttgttccctgcagctcacagtcacgaagcc 566

               
Query: 367 acac 370
           ||||
Sbjct: 567 acac 570


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space:   274721
Effective search space used:   274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no318_c09.g1 MSMg01no318_c09.g1 CHROMAT_FILE:
MSMg01no318_c09.g1 PHD_FILE: MSMg01no318_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:16 2005
         (339 letters)



>mm_chr9_98324398_98325136
          Length = 739

 Score =  648 bits (335), Expect = 0.0
 Identities = 338/339 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcaccggtacccccctgggagttcttcaaacgcctcttgagtgttgaaaacgcgtctcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tcaccggtacccccctgggagttcttcaaacgcctcttgagtgttgaaaacgcgtctcct 480

                                                                       
Query: 61  tcaggtttgctagcgtcatcaaggaagaggccatttacaggccttagtctaaagctcagc 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 479 tcaggtttgctagcgtcatcaaggaagaggccatttacaggcctttgtctaaagctcagc 420

                                                                       
Query: 121 atccgtggcctggccagttcctaggaagctgatgttttaactctagggatgaagagcaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atccgtggcctggccagttcctaggaagctgatgttttaactctagggatgaagagcaga 360

                                                                       
Query: 181 gcaactacccacagctctcccaggaaatgatgcgaagttggtggtattaaatatgcactg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gcaactacccacagctctcccaggaaatgatgcgaagttggtggtattaaatatgcactg 300

                                                                       
Query: 241 gacaagaaagcgctccaggtgaacccatgcacggtggtggtcagagacccaaggcttttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gacaagaaagcgctccaggtgaacccatgcacggtggtggtcagagacccaaggcttttt 240

                                                  
Query: 301 gcgcgtgtggactgacactattctgcgggatcgtgtggt 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gcgcgtgtggactgacactattctgcgggatcgtgtggt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space:   240900
Effective search space used:   240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)