Query= MSMg01no318_i07.b1 MSMg01no318_i07.b1 CHROMAT_FILE:
MSMg01no318_i07.b1 PHD_FILE: MSMg01no318_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:43 2005
(373 letters)
>mm_chr9_52947052_52947826
Length = 775
Score = 650 bits (336), Expect = 0.0
Identities = 361/372 (97%), Gaps = 6/372 (1%)
Strand = Plus / Minus
Query: 2 gaattctggtaaaatg----tccatatatattagaagactgaaattcaagaatttctata 57
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaattctggtaaaatgtatat--atatatattagaagactgaaattcaagaatttctata 514
Query: 58 atcattgcctagaaaactggcaataatttttagtgtttgcacacttacataattgtgtca 117
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atcattgcctagaaaactgggaataatttttagtgtttgcacacttacataattgtgtca 454
Query: 118 aattcttaaaattctattttagtagattatctaaactaataagtatatatctaacagagt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aattcttaaaattctattttagtagattatctaaactaataagtatatatctaacagagt 394
Query: 178 accttacatttcaaaactatgacatggcattgtcatgtatgaatgtgttgagctagaatc 237
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 393 accttacatttcaaaactataacatggcattgtcatgtatgaatgtgttgagctagaatc 334
Query: 238 atagctaccacagggttcctgtggcctctgggccacctcttgtacacatctggctagatt 297
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 333 atagctaccacagggttcctgtggcctctgggccacctcttggacacatctggctagatt 274
Query: 298 cctttgatgagtatattcctataggcagttgcctatttgacatctttatttggggtttaa 357
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cctttgatgaatatattcctataggcagttgcctatttgacatctttatttggggtttaa 214
Query: 358 agtgacaatctc 369
| ||||||||||
Sbjct: 213 aatgacaatctc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 775
Length adjustment: 9
Effective length of query: 364
Effective length of database: 766
Effective search space: 278824
Effective search space used: 278824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_i07.g1 MSMg01no318_i07.g1 CHROMAT_FILE:
MSMg01no318_i07.g1 PHD_FILE: MSMg01no318_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:43 2005
(248 letters)
>mm_chr9_52772538_52773185
Length = 648
Score = 344 bits (178), Expect = 2e-99
Identities = 229/246 (93%), Gaps = 4/246 (1%)
Strand = Plus / Plus
Query: 4 ggttgagtcccaa-attggcttaaatgccctttcttacctataccttcacaagtcccagc 62
|||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 204 ggttgagt-ccaagattggcttaaatgccctttcttacctatacctttacatgtcccagc 262
Query: 63 aatagctggtcccactatcattgtctgttagcttatctgtctcctctatcatggctggct 122
|||||||||| | |||||||||||||||| ||||||||||||||||||||||| | |||
Sbjct: 263 aatagctggttctactatcattgtctgttggcttatctgtctcctctatcatgt-tagct 321
Query: 123 tatctgtctcctccacacacttatcagatccgtgatgatagagtctcatcttcaattact 182
||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 322 tatctgtctcctccacacacttatcagatccttgaggatagagtttcatcttcaattact 381
Query: 183 tattgcagaagtggcatatagaagttaataattacttattaaaaa-tgaataaatcaatc 241
|| ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 382 tagtgcagaagtcgcatatagaagttaataattatttattaaaaaatgaataaatcaatc 441
Query: 242 aaagta 247
||||||
Sbjct: 442 aaagta 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
