Query= MSMg01no318_p16.b1 MSMg01no318_p16.b1 CHROMAT_FILE:
MSMg01no318_p16.b1 PHD_FILE: MSMg01no318_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:15 2005
(349 letters)
>mm_chr9_14429634_14430378
Length = 745
Score = 632 bits (327), Expect = 0.0
Identities = 342/349 (97%), Gaps = 4/349 (1%)
Strand = Plus / Minus
Query: 1 ttaaggagccgtggcttctttacaagttacactccagtttaatgtcctggactcttcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttaaggagccgtggcttctttacaagttacactccagtttaatgtcctggactcttcaga 486
Query: 61 agaggatgctgaccattgtaacagcatcatgcctagagattgatcggaaagccagttaag 120
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 485 ggaggatgctgaccattgtagcagcatcatgcctagagatt----ggaaagccagttaag 430
Query: 121 atcatggtgaacagtccgtgtcctctctcctgcaaaaactggtggtcattcaatactggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atcatggtgaacagtccgtgtcctctctcctgcaaaaactggtggtcattcaatactggc 370
Query: 181 aatggcctttagtgttcctgttcacatttagacttagagccttggtcttggtttgctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aatggcctttagtgttcctgttcacatttagacttagagccttggtcttggtttgctgag 310
Query: 241 tgcctggatagttcacattgccctgtgttctgtgcagatttggtaccctgggtcccctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgcctggatagttcacattgccctgtgttctgtgcagatttggtaccctgggtcccctta 250
Query: 301 aagtctcagaaagggcctggtcttcctgataactgcagaagcccaactc 349
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 249 aagtctcagaaagggcctggtcttcctgataactgcagaaacccaactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 745
Length adjustment: 9
Effective length of query: 340
Effective length of database: 736
Effective search space: 250240
Effective search space used: 250240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_p16.g1 MSMg01no318_p16.g1 CHROMAT_FILE:
MSMg01no318_p16.g1 PHD_FILE: MSMg01no318_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:15 2005
(348 letters)
>mm_chr9_14259996_14260743
Length = 748
Score = 621 bits (321), Expect = 0.0
Identities = 339/345 (98%), Gaps = 1/345 (0%)
Strand = Plus / Plus
Query: 1 cctcagcattaactgggagcacatgacagagcatgagagaagtgagacacacagaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cctcagcattaactgggagcacatgacagagcatgagagaagtgagacacagagaacatg 260
Query: 61 tctgtgctcttgctggacatactttacctctgccccaccacctctaaacatgaaatacac 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tctgtgctcttgctggacatactttacctctgccccaccacctctaaacgtgaaatacac 320
Query: 121 aagaaaatcgcagggtcctcaagttctgaacacttagacaatgataattatttaaccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaaaatcgcagggtcctcaagttctgaacacttagacaatgataattatttaaccaga 380
Query: 181 aactagcacaaacacaggaacgtgaatgcctttttgctaggcattgggttgcacacctcg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 aactagcacaaacacaggaacgtgaatgcctttttgctaggcattgggttgcacgcctcg 440
Query: 241 cctttaatcccatctctgcaggcaggggcaggtggatctatgaatttgagaatagcctgg 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 cctttaatccca-ctctgcaggcaggggcaggtggatctatgaatttgagaacagcctgg 499
Query: 301 tttacagattcagttccagaacagtcaggattacaaggataaacc 345
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 500 tttacagattcagttccagaacggtcaggattacaaggataaacc 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
