Query= MSMg01no319_f02.b1 MSMg01no319_f02.b1 CHROMAT_FILE:
MSMg01no319_f02.b1 PHD_FILE: MSMg01no319_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:38 2005
(373 letters)
>mm_chr9_119727184_119727956
Length = 773
Score = 584 bits (302), Expect = e-171
Identities = 328/344 (95%), Gaps = 13/344 (3%)
Strand = Plus / Minus
Query: 30 tttttatctgtgtgcacgggtgatttgtctgtgtgtgtgtctatgtacctaccactgtat 89
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 773 tttttatctgtgtgcacgggtgatttgtctgtgtgtgtgtctatgcacctacca-tgtat 715
Query: 90 gtgcagtgcccacggaggctggaagagggggtaagataccctggacctggggttatagat 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gtgcagtgcccacggaggctggaagagggggtaagataccctggacctggggttatagat 655
Query: 150 ggttgtgagatgtcatgtaggtgctggcaattgaacccaagtcgtctggaatagcagcca 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggttgtgagatgtcatgtaggtgctggcaattgaacccaagtcgtctggaatagcagcca 595
Query: 210 atgttcttaaccactgagccatctctccagccctctcagatgtaattcttgctggaaatt 269
|||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 594 atgttcttaaccactgagcc------------ctctcagatgtaattcttgctggaaatt 547
Query: 270 ctagaatgacttaagaatgaggaagtctgatttctggctctacttggctccttgaaagcc 329
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctagaatgacttcagaatgaggaagtctgatttctggctctacttggctccttgaaagcc 487
Query: 330 tgaggtgtgagctccccttgccccgagaggattccctcttttaa 373
|| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tggggtgtgagctccccttgccccgagaggattccctcttttaa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_f02.g1 MSMg01no319_f02.g1 CHROMAT_FILE:
MSMg01no319_f02.g1 PHD_FILE: MSMg01no319_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:38 2005
(343 letters)
>mm_chr9_119549794_119550536
Length = 743
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%)
Strand = Plus / Plus
Query: 1 actaagaaaatgtgcagttttcttaagtgaggtaggagggttagacattaccattagaat 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaagaaagtgtgcagttttcttaagtgaggtaggagggttagacattaccattagaat 260
Query: 61 ctccttatcgagactggtgattgccatcattaatctgtaaggttagaagcgaatggtgta 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctccttatcgaggctggtgattgccatcattaatctgtaaggttagaagcgaatggtgta 320
Query: 121 tactcttcaatctaggacatgaatggagtcatcttctattactttttgtctttataaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactcttcaatctaggacatgaatggagtcatcttctattactttttgtctttataaaag 380
Query: 181 acaaaataaaccacaaccaggatctacccacttgtgttgctgactctcagccagtcagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaaataaaccacaaccaggatctacccacttgtgttgctgactctcagccagtcagtc 440
Query: 241 agcacacattgggtcagccagtcagtccgcatacattagggagtctgtccactgctgggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcacacattgggtcagccagtcagtccgcatacattagggagtctgtccactgctgggg 500
Query: 301 ctgaggggccgcagcctgctggctcctgctgatgcccgagtga 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgaggggccgcagcctgctggctcctgctgatgcccgagtga 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|