XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AAAAAAATCTTCCGATCCTACTATAAAAGCCTGTATTCAATGAAACTGGA
AAATCTAGATGAAATGGGTGGTTTTCTAGACAGATGCCACACACTAATGT
TAAATCAAGAGCAGGAAAACTATCTAAACAGGCCCATATCACACAAGGAA
ATAGAGGAAGTCATTAAAAACCACCCAGCTAAAAAAAGCCCAGGGCCAGA
TGGATTTAGTGCAGAATTCTACCAGACTTTCAAAGAAGACCTGGTAACAA
TTTTCCTCAAACTATCCTATAAAATAGAAACAGAAGGAATAATACCTACC
TTGTTCTATGAAGGCACAATTACTATGATGGGTAAACCACACAAAGATAC
AACCAAAAAAGAGAACTTCACACCAATCTTGTTTATGAATATCAGTGCAA
AAATAATAAAATTCTTGCAAACCAAATCCGAGAAGACATTAAAACCATCA
TTCAACATGATCAAGTAGGCTCATCCCAGGGATGCAAGGTTGGTTTAATA
TATGAAAATCCATTAACATAATCCACTATGTAAACAAACTCAAAGGAAAA
AAAAAAACACATGATCATCTCCTTAAATGCTGAAAAAAACATTTGAGAAA
GTGCAACACTCCTTCCTGTTAAAAGCGATCAGGAATTCAAGGCCTACTAT
ACCTAAGCATAATAAAAGCAATTTACTATTAACN

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCGATTGTGAAAACTAAGAGTATTTCCATGTTTG
AAAAGCTAAACTTATAGATGTCACTTTGAAAAGCATGCATGAGTTCAGAT
CTCAAGATATAAGTCTAAAAACAGATTCATAAGACATTTCTAGAAATGTA
TAAAACTCTGAGAGAAATGACACAAATGCTTCTGAGAGGGAAAAAGACTT
GAGATTCTGATATGTCATTTTCTCTAATGGGTTTTTATGGCCAATAAAAA
TTTTTAAATCCCAACTGTGATCTTATAGTGAACTTATCATTTACTTAGGG
TAAAGCAAAGATGGAGACAGGCTTCAGTGAGCCCTGTGGCTACAGAAAGA
TCCAATAGTAATGGACAAAAGAGAAAAACACTCTATAGAAACTAGAAAAA
AAGTCTAGATATTTAATTCATTTTAAGATATAAAATTCCAGAATAGTTAG
TAAATCGTGATGCTTTACATGAAAACATGGGGACAGTAGAAATCCCAATT
GTACCTCTGGAGACAACTTCTCTGTATACAAATAAGTCACAGTGGGGTAA
CTACCTTAACTAGGCAATGGAAAACAACAAAGGCAACAAAGAACGGCAAA
GTTTAAAGCATTAGAATAGAACACTTTTTACAAAAATAAATAAATAAATA
AATTCACAACTGATTCAAGTTATGCTTATAATA

Query= MSMg01no319_n18.g1 MSMg01no319_n18.g1 CHROMAT_FILE:
MSMg01no319_n18.g1 PHD_FILE: MSMg01no319_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:15 2005
         (664 letters)



>mm_chr9_17822574_17823637
          Length = 1064

 Score = 1116 bits (577), Expect = 0.0
 Identities = 647/683 (94%), Gaps = 20/683 (2%)
 Strand = Plus / Plus

                                                                       
Query: 2   gattgtgaaaactaagagtatttccatgtttgaaaagctaaacttatagatgtcactttg 61
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 202 gattgtgaaaactaagagtgtttccatgttttaaaagctaaacttatagatgtcactttg 261

                                                                       
Query: 62  aaaagcatgcatgagttcagatctcaagatataagtctaaaaacagattcataagacatt 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 262 aaaagcatgcatgagttcagatctcaagatataagtctaaaaacagattcataagatatt 321

                                                                       
Query: 122 tctagaaatgtataaaactctgagagaaatgacacaaatgcttctgagagggaaaaagac 181
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
Sbjct: 322 tctagaaatgtataaaactctgagagaaatgacacaaatgtttctgagagggaaaatgtc 381

                                                                       
Query: 182 ttgagattctgatatgtcattttctctaatgggtttttatggccaataaaaatttttaaa 241
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 382 ttgagattctgatatgtcattctctctaatgggtttttatggccaataaaaattttaaaa 441

                                                                       
Query: 242 tcccaactgtgatcttatagtgaacttatcatttacttagggtaaagcaaagatggagac 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcccaactgtgatcttatagtgaacttatcatttacttagggtaaagcaaagatggagac 501

                                                                       
Query: 302 aggcttcagtgagccctgtggctacagaaagatccaatagtaatggacaaaagagaaaaa 361
           |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 502 aggcttcagtgagcactgtggctacagaaagatgcaatagtaatggagaaaagagaaaaa 561

                                                                       
Query: 362 cactctatagaaactagaaaaaaagtctagatatttaattcattttaagatataaaattc 421
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 562 cactctatagaaactagaaaaaaagtctagatatttaattcattttaaaatataaaattc 621

                                                                       
Query: 422 cagaatagttagtaaatcgtgatgctttacatgaaaacatggggacagtagaaatcccaa 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cagaatagttagtaaatcgtgatgctttacatgaaaacatggggacagtagaaatcccaa 681

                                                                       
Query: 482 ttgtacctctggagacaacttctctgtatacaaataagtcacagtggggtaactacctta 541
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tagtacctctggagacaacttctctgtatacaaataagtcacagtggggtaactacctta 741

                                                                       
Query: 542 actaggcaatggaaaacaacaaaggcaacaaagaacggcaaagtttaaagcattagaata 601
           ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 742 actaggcaatggaaaacaacaaaggcgtcaaagaacggcaaagtttaaagcattagaata 801

                                                                       
Query: 602 gaacactttttacaaaaataaataaataaataaat--------------------tcaca 641
           |||||||||||||||||||||||||||||||||||                    |||||
Sbjct: 802 gaacactttttacaaaaataaataaataaataaataaataaataaataaataaattcaca 861

                                  
Query: 642 actgattcaagttatgcttataa 664
           ||||||||||||||||| |||||
Sbjct: 862 actgattcaagttatgcgtataa 884


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)