Query= MSMg01no319_o05.b1 MSMg01no319_o05.b1 CHROMAT_FILE:
MSMg01no319_o05.b1 PHD_FILE: MSMg01no319_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:17 2005
(289 letters)
>mm_chr9_28669304_28669992
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Plus
Query: 1 ccaaattttaatctctaaaaaatatgtttatttcataggcttccctcagttacattttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaaattttaatctctaaaaaatatgtttatttcataggcttccctcagttacattttgc 260
Query: 61 taaaatgactgaaactaataaagctgacactgagcctgctggcagtgtttacgccaacat 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaacgactgaaactaataaagctgacactgagcctgctggcagtgtttacgccaacat 320
Query: 121 ttcccaaaatatgttatgtggaaaggacactgctaggtgatatgtggcaaaaaaggaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcccaaaatatgttatgtggaaaggacactgctaggtgatatgtggcaaaaaaggaggc 380
Query: 181 tcaggaaataaataaatatatttggaaaacaatgtcttaaataaacgttaagtgtgggtg 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaggaaataaataaatacatttggaaaacaatgtcttaaataaacgttaagtgtgggtg 440
Query: 241 ctgccgcaggatttttgctgcagtttgagtgggctaatgtgccttgtaa 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgccgcaggatttttgctgcagtttgagtgggctaatgtgccttgtaa 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_o05.g1 MSMg01no319_o05.g1 CHROMAT_FILE:
MSMg01no319_o05.g1 PHD_FILE: MSMg01no319_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:17 2005
(343 letters)
>mm_chr9_28828846_28829587
Length = 742
Score = 625 bits (323), Expect = 0.0
Identities = 338/343 (98%), Gaps = 1/343 (0%)
Strand = Plus / Minus
Query: 1 agaatgtttctcaagccctcaagcagacttacctgggatatgcaacaccacttgatttgt 60
||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 542 agaatgtttttcaagccctcaagcagacttacctgggatatgcaacaatacttgatttgt 483
Query: 61 ttttaagaagaagtgatcccgagaaattgtatttcttgtaaatcaaatcctattttaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttttaagaagaagtgatcccgagaaattgtatttcttgtaaatcaaatcctattttaagt 423
Query: 121 ggaaagagtagagatgctaattaagggatatatgatgaatcctttgtagagtttattaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggaaagagtagagatgctaattaagggatatatgatgaatcctttgtagagtttattaca 363
Query: 181 tccctaccagcaaagatgatatctgaccttctttcatttcttagctgagatttgcttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tccctaccagcaaagatgatatctgaccttctttcatttcttagctgagatttgcttgcc 303
Query: 241 ttgctttttttatattaaagtgcccaaatttagttcataccactgaaactagtaggtgtg 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttgc-ttttttatattaaagtgcccaaatttagttcataccactgaaactagtaggtgtg 244
Query: 301 gtatttctattcattgaggggaatgcccatcttatgcactcat 343
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 243 gtatttctattcattgaggggaatgcccatattatgcactcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 742
Length adjustment: 9
Effective length of query: 334
Effective length of database: 733
Effective search space: 244822
Effective search space used: 244822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
