Query= MSMg01no319_o06.b1 MSMg01no319_o06.b1 CHROMAT_FILE:
MSMg01no319_o06.b1 PHD_FILE: MSMg01no319_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:17 2005
(373 letters)
>mm_chr9_6432581_6433356
Length = 776
Score = 673 bits (348), Expect = 0.0
Identities = 365/372 (98%), Gaps = 3/372 (0%)
Strand = Plus / Minus
Query: 5 gaattccatggt---aggttaaagcatcctctcagggtatggtgctgttgctgacaggat 61
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 576 gaattccatggtagaaggttaaagcatcctctcagggtatggtgctgttgccgacaggag 517
Query: 62 tatggcagcacaaccagcatgtcttgaagacatgttccttccagagaagatgaatatttg 121
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tatggcagcacagccagcatgtcttgaagacatgttccttccagagaagatgaatatttg 457
Query: 122 ttcttttcaagacagctcactagtcatccacagggagtgagttttgctcagctttagtct 181
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 456 ttcttttcaagacagctcactagtcatccatagggagtgagttttgctcagctttagtct 397
Query: 182 ttgattttggcaaaatagacaagttattaggcagatcattcttggtaaaaggatattgat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttgattttggcaaaatagacaagttattaggcagatcattcttggtaaaaggatattgat 337
Query: 242 gtagctgaatcctcatggtctcattattttaatcattttgggttttggtccaggtagcaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtagctgaatcctcatggtctcattattttaatcattttgggttttggtccaggtagcaa 277
Query: 302 gcactaatatggttagagagagattcatgtcctgaaagtatgttgcctatacacaaattg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gcactaatatggttagagagagattcatgtcctgaaagtatgttgcctatacacaaattg 217
Query: 362 ctgataagaatc 373
||||||||||||
Sbjct: 216 ctgataagaatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 776
Length adjustment: 9
Effective length of query: 364
Effective length of database: 767
Effective search space: 279188
Effective search space used: 279188
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_o06.g1 MSMg01no319_o06.g1 CHROMAT_FILE:
MSMg01no319_o06.g1 PHD_FILE: MSMg01no319_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:17 2005
(598 letters)
>mm_chr9_6407215_6408213
Length = 999
Score = 1096 bits (567), Expect = 0.0
Identities = 591/599 (98%), Gaps = 1/599 (0%)
Strand = Plus / Plus
Query: 1 attcacagaggaagcagggataagatctctaggtttcaccgaccaacctatgcagtctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcacagaggaagcagggataagatctctaggtttcaccgaccaacctatgcagtctaa 260
Query: 61 ttggtaagactcaagataccgagaggtactttctcaaaagagatagatggcattctgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ttggtaagactcaagataccgagaggtactttctcaaaagagatagatggcatcctgagt 320
Query: 121 atgtcctctgtcttccacatgatcagacacatacaagatgaacatacatatttcaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtcctctgtcttccacatgatcagacacatacaagatgaacatacatatttcaaaaaa 380
Query: 181 cttagaaaactagaatcacatacttgaaaattactttgaaatgtaataaatcagcatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttagaaaactagaatcacatacttgaaaattactttgaaatgtaataaatcagcatact 440
Query: 241 gtcacatcctctagactcatactctcccatgtgaagcaacattaagattagataaagaga 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gtcacatcctctagactcatactctcccatgtgaagcaactttaagattagataaagaga 500
Query: 301 catgttcctgcttttctcatttgcacatcatagatacaatttacacaaaactggaaaagc 360
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 501 catgttcctgcttttctcatttgcacatcatagatacaatttatagaaaactggaaaagc 560
Query: 361 acatggcttcctctgcctttttttc-tctcactctacttaaaacagcaagttcagaaaga 419
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 561 acatggcttcctctgcctttttttcctctctctctacttaaaacagcaagttcagaaaga 620
Query: 420 cccaaggatggagagcattttggggctaacatgaaaataagaatatcaaaattcacattt 479
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacaaggatggagagcattttggggctaacatgaaaataagaatatcaaaattcacattt 680
Query: 480 ggaagtatcatgtcactgtgaaatggaattattttttttcctttgaaagtggcactaaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaagtatcatgtcactgtgaaatggaattattttttttcctttgaaagtggcactaaaa 740
Query: 540 gactgcaagagacagaagtgtaaagtcaactatttatattcaactcatgttcgcccaaa 598
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 741 gactgcaagagacagaagtgtaaagtcaactctttatattcaactcatgttcgcccaaa 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 999
Length adjustment: 10
Effective length of query: 588
Effective length of database: 989
Effective search space: 581532
Effective search space used: 581532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
