Query= MSMg01no322_i10.b1 MSMg01no322_i10.b1 CHROMAT_FILE:
MSMg01no322_i10.b1 PHD_FILE: MSMg01no322_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:30 2005
(295 letters)
>mm_chr9_47477775_47478469
Length = 695
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Minus
Query: 1 ttattaaagagttgacttttctctttataatatagagagaatctgaattatatggcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttattaaagagttgacttttctctttataatatagagagaatctgaattatatggcatct 394
Query: 61 tctattttggcaagttttgacaaaaacagatggcataaacctctatgtagcaaggaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tctattttggcaagttttgacaaaaacagatggcataaacctctatgtagcaaggaagga 334
Query: 121 tagaaggtgaaggaaaagaggcaagatgctacttaaaccttttttcaagagtaagtacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tagaaggtgaaggaaaagaggcaagatgctacttaaaccttttttcaagagtaagtacca 274
Query: 181 taaagttgtgaggtcactgactatgtcacctatttaacctcaaggaaggtgatccacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 taaagttgtgaggtcactgactatgtcacctatttaacctcaaggaaggtgatccacact 214
Query: 241 aaccagtgtagcatctgcagcagcagcagcagcagcagcagcagcagcagca 292
||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 213 aaccagtgtagcagcagcagcagcagcagcagcagcagcagcagcagcagca 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_i10.g1 MSMg01no322_i10.g1 CHROMAT_FILE:
MSMg01no322_i10.g1 PHD_FILE: MSMg01no322_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:30 2005
(288 letters)
>mm_chr9_47287416_47288102
Length = 687
Score = 505 bits (261), Expect = e-147
Identities = 279/285 (97%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 1 ctacctgctcacctcttaaatcatctgcttctgactgcaggaggtgacagagtctccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacctgctcacctcttaaatcatctgcttctgactgcaggaggtgacagagtctccaac 260
Query: 61 gaactaaaatagtcatctttcaaggttaacaaggagctacttagaagccccagcatgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaactaaaatagtcatctttcaaggttaacaaggagctacttagaagccccagcatgact 320
Query: 121 gtcaatagccaatcaaggggagctgtcagccgctccccctgaggaagggcttcagctaaa 180
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gtcaatagccaatcaagggaagctgtcagccgctccccc-gaggaagggcttcagctaaa 379
Query: 181 ccaatgagaagcgccggggtggctgcatctggagaagaaccagctgcttggcttctgtgt 240
||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||
Sbjct: 380 ccaatgagaagcgccggggtgtctgcatctggagaagaaccggcttcttggcttctgtgt 439
Query: 241 tggaacccatagccgaaggtgagcgaggtggggtggtgccattct 285
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 tggaacccagagccgaaggtgagcgaggtggggtggtgccattct 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
