Query= MSMg01no323_g16.b1 MSMg01no323_g16.b1 CHROMAT_FILE:
MSMg01no323_g16.b1 PHD_FILE: MSMg01no323_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:56 2005
(577 letters)
>mm_chr9_41379533_41380509
Length = 977
Score = 1093 bits (565), Expect = 0.0
Identities = 574/577 (99%)
Strand = Plus / Minus
Query: 1 agagtataccatgtccccagtcccttcctgtcggtctcagttttagctgagcatctttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 agagtataccatgtccccagtcccttcctgtcggtctcagttttagctgagcatctttgt 718
Query: 61 tctgccacacccttctagtcattcagccggacctcaccacaaagggccatagaccaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tctgccacacccttctagtcattcagccggacctcaccacaaagggccatagaccaaaac 658
Query: 121 ctctggactcaggagtcaatcttttctcctttaaaatgttttttttctctagtattttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ctctggactcaggagtcaatcttttctcctttaaaatgttttttttctctagtattttta 598
Query: 181 cacaaagactgaaaaacctacacaccaggtattaggaaaaatcaacaatcccccaatata 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cacaaagactgaaaaaccaacacaccaggtattaggaaaaatcaacaatcccccaatata 538
Query: 241 tacaaataatagtatttgttgttatgaatttttaaaacgattctgtttccccttctgcct 300
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 537 tacaaataatagtatttgttgttatgaatttagaaaacgattctgtttccccttctgcct 478
Query: 301 cagtgggtgcccttttcagccttcgagcctaaccatgcagaaggcgtgttgcttgtcgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 cagtgggtgcccttttcagccttcgagcctaaccatgcagaaggcgtgttgcttgtcgaa 418
Query: 361 tggggccacacggagcctgaagattctggaaagtaatgtgcagtcagaccatggattgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tggggccacacggagcctgaagattctggaaagtaatgtgcagtcagaccatggattgat 358
Query: 421 tgccctgagagccggtgaaaggaagaggagagatgtctccatctctgggataatgagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgccctgagagccggtgaaaggaagaggagagatgtctccatctctgggataatgagaga 298
Query: 481 gaaaagagtcctcccaaagatgaatgtctatttacctgtatgccaagaagactctgtgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gaaaagagtcctcccaaagatgaatgtctatttacctgtatgccaagaagactctgtgac 238
Query: 541 atccagttcattatccttggccaaagggtgccatcta 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 atccagttcattatccttggccaaagggtgccatcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_g16.g1 MSMg01no323_g16.g1 CHROMAT_FILE:
MSMg01no323_g16.g1 PHD_FILE: MSMg01no323_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:56 2005
(336 letters)
>mm_chr9_41220476_41221211
Length = 736
Score = 588 bits (304), Expect = e-172
Identities = 329/338 (97%), Gaps = 2/338 (0%)
Strand = Plus / Plus
Query: 1 ccatggtcaggactgggagatgacacccgtgtggtgtccaaggacaaagccaggcctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccatggtcaggactgggagatgacacccgtgtggtgtccaaggacaaagccaggcctcca 260
Query: 61 gacccagaaagcacccaggagaatcctgataggctaggtgtcatgtcgtctaccccacag 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaccctgaaagcacccaggagaatcctgataggctaggtgtcatgtcgtctaccccacag 320
Query: 121 gctgaataggtctccaggaagaggcccctctgtctcccatccttaaggtatgatttctac 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgaataggtatccaggaagaggcccctctgtctcccatccttaaggtatgatttctac 380
Query: 181 atcatgtaacaatccagccactgtttctgagaccatgtcaaacataataaaacctcagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcatgtaacaatccagccactgtttctgagaccatgtcaaacataataaaacctcagag 440
Query: 241 gctctcctattgctgaagagccaatcaacctaaactatttttttaatgaccacttttccc 300
||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 441 gctttcctattgctgaagagccaatcaacctaaactaatactttaatgaccacttttccc 500
Query: 301 aatgagaaaacaaatttggggagaaaaaaa--ggaagc 336
|||||||||||||||| ||||||||||||| ||||||
Sbjct: 501 aatgagaaaacaaattcggggagaaaaaaaaaggaagc 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
