CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAACTGTTGCCTACCGAATGGCTGAGAAACGCCTAAAAAATGTT
CATCATCCTTAATTATCAGGGGAATGCAAATCAAAACAACCCTGAGATTC
CACCTCATACCAGTCAGAATGGCTAAGATAAAAAATTCAGGTGATAGCAG
ATGCTGGTGAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGAG
ACTGCAAGCTGGTACTCTGGAAATCAGAAAAGTGGACATAGTACTATCAG
AAGATCCAGCAATACGACTACTGGGAATATACACAGAAGATGCTCCAACT
TGTAATAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT
AGCCAGAAGCTGGAAAGAAACCTCAACGGAGGAATGGATACAGAAAATGT
GATACATTTGCACAATGAAGTACTACACAGCTATTTAAAACAATGAATTT
ATGAAATTCTTAGATAAATGATGGATCTGGAGGATATCATCCTAAGTGAG
GTAACCCAATCATAAAAGAACACACATGATGTGCACTCACTGATAAGTGG
ATATTAGCCCAGAATCTCAGAATATCCAAGATCCAATTTGCAAAACAGAT
ACAGTTCAAGAAGAAGGAAGACCAAAGTGTGGATACTTTGATCCTTCCTA
GAAGAGGGGACAAAGTACCCGTGGAAAGATTN

CCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTACATGTTCATAAAAAATACATTTC
ATTTTCTTTGCACAGGGCAAATGGGAAGACTATCTGTGGGCCTCATTGGC
TCTCTTCTGGCTGTGGGCTCTAGGTAGAGGAGGTATACATGTTTCAGCCT
TACCACAGTGCTTGTTGATAATTATCCATGTTCTTCCTTCTTCTGTTACA
TTGTGGGATCACAATGGATGAAAACAGTTCCCCAACTGGGTTTTCTAGTC
ACCACCTGGAGGAGGATTCTCAAGAGTGAAGCTCTAGCAGCATCGACTGT
GATGTGAGTGCCAGAATTAGTCACCAAGATAGGGGTGTTTCAATATGACT
GAAGGGCAAGCCAACCTATCTTGATACCTGCACACACACACACACAGACA
TACAGACAGACACACACAGACACACAGACACACAGACACACAGACACACA
CACACACACACACACACACACACACACACACACACAAACTTCATATGTGA
GCCTCAAGGTACCATCAATCATCATTGTAATTAAATTCAGAACCTTTACT
TGGTATTGTATGAACCAGTTAGAGAACTCTTCACTGAGGAAGACCATCTT
CTACTCTCAACATTCCTTCCTTGCCTATAGTTCTTTGCCTTGATTAAAAC
CAATGTTTTATAGTAGA

Query= MSMg01no324_a24.g1 MSMg01no324_a24.g1 CHROMAT_FILE:
MSMg01no324_a24.g1 PHD_FILE: MSMg01no324_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:17 2005
         (642 letters)



>mm_chr9_79154345_79155385
          Length = 1041

 Score =  911 bits (471), Expect = 0.0
 Identities = 523/555 (94%), Gaps = 25/555 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   tacatgttcataaaaaatacatttcattttctttgcacagggcaaatgggaagactatct 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tacatgttcat-aaaaatacatttcattttctttgcacagggcaaatgggaagactatct 496

                                                                       
Query: 61  gtgggcctcattggctctcttctggctgtgggctctaggtagaggaggtatacatgtttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtgggcctcattggctctcttctggctgtgggctctaggtagaggaggtatacatgtttc 436

                                                                       
Query: 121 agccttaccacagtgcttgttgataattatccatgttcttccttcttctgttacattgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 435 agccttaccacagtgcttgttgataattatccatgttcttccttcttctgtcacattgtg 376

                                                                       
Query: 181 ggatcacaatggatgaaaacagttccccaactgggttttctagtcaccacctggaggagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggatcacaatggatgaaaacagttccccaactgggttttctagtcaccacctggaggagg 316

                                                                       
Query: 241 attctcaagagtgaagctctagcagcatcgactgtgatgtgagtgccagaattagtcacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 attctcaagagtgaagctctagcagcatcgactgtgatgtgagtgccagaattagtcacc 256

                                                                       
Query: 301 aagataggggtgtttcaatatgactgaagggcaagccaacctatcttgatacctgcacac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aagataggggtgtttcaatatgactgaagggcaagccaacctatcttgatacctgcacac 196

                                                                       
Query: 361 acacacacacagacatacagacagac----------------acacacagacacacagac 404
           ||||||||||| ||| ||| ||| ||                ||||||||||||||||||
Sbjct: 195 acacacacacacacacacacacacacacacacacacacacagacacacagacacacagac 136

                                                                       
Query: 405 acacagacacacagacacacacacacacacacacacacacacacacacacacaca----- 459
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 135 acacagacacacagacacacacacacacacacacacacacacacacacacacacatacac 76

                                                                       
Query: 460 ---caaacttcatatgtgagcctcaaggtaccatcaatcatcattgtaattaaattcaga 516
              |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 75  acacaaacttcatatgtgaacctcaaggtaccatcaatcatcattgtaattatattcaga 16

                          
Query: 517 acctttacttggtat 531
           |||||||||||||||
Sbjct: 15  acctttacttggtat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 125
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space:   651592
Effective search space used:   651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)