CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTATTTAGCTCTGTAGCCTCTTCTTTATTTGGGTTATTTGGCTTG
TTGAAGTCTATCTTGAGCTCCTTATATATTTTGTATATTAGCCCTTTGTC
AGATGTAGGGGTGGTGAATATCTTTTATTATTCTGTAGGTGGCCTTTTTG
TCCAATTGACAGTGTCCTTTGCCTTACTGAAGCTTCTCGGTTTCATGAGG
TTCCATTTACCAATTGTCTTAGAGCCTGAGTCAGTGATGTTCTGTCTCCT
GTACCAATGCATTCAAGGCTATTTCCCACTTTCTCTTCTATGAGATTTAG
TGTGTCCGGTTTTATGTTGAGGTTCTTTTATTCATTTGAACTTGAATTTT
GTGCAGGTTGACAAATATGAATTAATTTGAATTCTTATGCATGCAGACCC
CCAGTTAGACCAGCACTAGTTTTTGAAGGTGCTTCTCTTTTTTTTTTTCC
ATTGTGGGGTTTTAGCCTCTTTGTCAAAAGTGAAGTGTCTGTAGGTGTGT
GGGTTTATTTCTGGGTCTTTGATTCTAGTCCATTGATCTACCTGTTTGTT
GCTGTACCAATACCAAGGAGTTTTTTTTTATCACTATTGCTCTGCTGTAC
AGCTTGATATCAGGATGGTGATTCTCCTCAAATTTCTTTTATTGTTCAGG
GTCATTGTGGCTATACTGTTTTTN

AATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGGCCAGCCTGGTCTACAGAGTGAGT
TCCAGGACAGCCAGAGCTATACAGATAAACCCTGNTCTCGAAAAAAAAAA
AAAACAAAAAAACAAAAAACAAAAACAAACAAACAAACAAACAAAAAACC
CAAACCAAAACAACAAAAAAGTATTCAAGGAAGAAATGAGGACAGGTGGA
GCACGTAAGAGCTCATATCATAAGCTGTATGAATTTATAGTTGTCCTCTT
TGCTTAAAGTTGCTTCTAAAAAGACAAATGACATCATGAATTTCTGCCTC
TCACATATAAACAATACATATATAACAATAATAGAATAAAAGGGGGAGGG
CAATATATAAAAGTATCCTCATCGTAAATCACTGGGACCAAATATGAACT
GAAATCCACTGCAGCAATTTAAGATACATTCTGTATAGATGGAGGAATCC
TTGGGAAAATAACCCTGAAATAACAGTAGAATTATCAAAGGAGTTAGTGC
ATTAAATGTAAAATATGTAAGATAAAAAGAGTAAAACGGACATGAACCCA
CAGGAAATAGTAAGTACAGTGGCAACTGTAAATCAATATCATACTTCAAC
AATTGAGGCAAAACATGAAAATCATCAGGGTGGTAATTTTAAAAACAAGC
ATTTTGGGACTCAACAATACAGAGAGAATACAGAGAATGG

Query= MSMg01no325_h24.g1 MSMg01no325_h24.g1 CHROMAT_FILE:
MSMg01no325_h24.g1 PHD_FILE: MSMg01no325_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:01 2005
         (647 letters)



>mm_chr9_33637447_33638491
          Length = 1045

 Score = 1122 bits (580), Expect = 0.0
 Identities = 638/666 (95%), Gaps = 22/666 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggccagcctggtctacagagtgagttccaggacagccagagctatacagataaaccct 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 183 caggccagcctggtctacagagtgagttccaggacagccagagctatacagagaaaccct 242

                                                                       
Query: 61  gntctcgaaaaaa----aa-aa-aa-aacaaaaaaacaaa---aaacaaaaacaaac--- 107
           | |||||||||||    || || || ||||||||||||||   ||| ||||||||||   
Sbjct: 243 g-tctcgaaaaaacaacaacaacaacaacaaaaaaacaaaaacaaaaaaaaacaaacaaa 301

                                                                       
Query: 108 ------aaacaaacaaacaaaaaacccaaaccaaaacaacaaaaaagtattcaaggaaga 161
                 |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 302 aaacaaaaacaaacaaacaaaaaacccaaa-caaaacaacaaaaaagtattcaaggaaga 360

                                                                       
Query: 162 aatgaggacaggtggagcacgtaagagctcatatcataagctgtatgaatttatagttgt 221
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgaggacaggtggagcatgtaagagctcatatcataagctgtatgaatttatagttgt 420

                                                                       
Query: 222 cctctttgcttaaagttgcttctaaaaagacaaatgacatcatgaatttctgcctctcac 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctctttgcttaaagttgcttctaaaaagacaaatgacatcatgaatttctgcctctcac 480

                                                                       
Query: 282 atataaacaatacatatataacaataatagaataaaagggggagggcaatatataaaagt 341
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 atataaacaatacatatataacaataatagaataaaagggggaggacaatatataaaagt 540

                                                                       
Query: 342 atcctcatcgtaaatcactgggaccaaatatgaactgaaatccactgcagcaatttaaga 401
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 atcctcatcgtaaatcactgggaccaaatatgaactgaaatccactgaagcaatttaaga 600

                                                                       
Query: 402 tacattctgtatagatggaggaatccttgggaaaataaccctgaaataacagtagaatta 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tacattctgtatagatggaggaatccttgggaaaataaccctgaaataacagtagaatta 660

                                                                       
Query: 462 tcaaaggagttagtgcattaaatgtaaaatatgtaagataaaaagagtaaaacggacatg 521
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcaaaggagttagtgcattaaatgtaaaatatgtaagataaaaagagtaaaacggacatg 720

                                                                       
Query: 522 aacccacaggaaatagtaagtacagtggcaactgtaaatcaatatcatacttcaacaatt 581
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aacccacaggaaatagtatgtacagtggcaactgtaaatcaatatcatacttcaacaatt 780

                                                                       
Query: 582 gaggcaaaacatgaaaatcatcagggtggtaattttaaaaacaagcattttgggactcaa 641
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 -aggcaaaacatgaaaatcatcagggtggtaattttaaaaacaagcattttgggactcaa 839

                 
Query: 642 caatac 647
           ||||||
Sbjct: 840 caatac 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1045
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1035
Effective search space:   659295
Effective search space used:   659295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)