TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGC
NGGAATTCCACACAATTTCCAGTAAATAAAGAGAAAACTTCAAAGACAAT
ACAAAAATTAAATAAAATTCTTTAGAGTTGAACAAGATGAATTTTGTGTA
TGGAAAAGTTTATTGACAGCTCAGTGGCCGAGCATTTGCCTAGTGTGTGA
GAAGCCTGACACAGTGTATCTTAGCCGACTATCAGGCACACGGGCATTGT
TGCTTTCCCGGGAGCTGATAGCTTCCATGCATCTCTTTACAAATATTTCA
AAGGGAAAGCGAAATGATTGATTAGGAGGACAATAGTTAACACTCATAAC
ACTGCCAATCAAAGATGGACTCATTCAAACTTCTTGACAGATTTAACTTG
GGTTGATGGGGGGAGGAGAGCACCACCCCTGGTGGTGGGCTCAGCAGGAG
CTAACTCAACATCCATCCTCTGTGTTAGTGAGCCAGCAGGTCACCTTAAC
ATCATTACAATTAAGCAATAGGAGAGAAGCCACGCCCAGGGGAAACACAT
AGCAGGTAAAGGGGATGGGTCTGGTGGCTTCTGTCTGGGATATGATTTTC
CTTCAGCCCAAGTATTAAGCACTGGTAACCAGGTAAAACAAGAAGAAATT
ACTTTGATAAAAGTATTTTTTAAATTTTAAAAATGTATGGTGCCGACATC
ATGCCATGGTTTCATG

CAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACACTCAGCTGGCATTGTAAGTAAG
ACTGAAGGCAGGAAGTAAAAACTAGCTTCTGCCTTCACACGCATGGCGAT
TGCAGGCATGTCACAATTACAGAATAAATTAAATGAATCTAGAACCCAGA
TGGTTGACCTCATGTATGCTGTCTTTATCAACGTTACTTATACTAATGTA
GCTCCGTTTCTTTCTCTGAAAAATGAGAGAGACAAAAAGTTTGTCACCTC
TCTGCCCCACCCTGCTGACGTGAGGCTTAAATGAGAATATGTTTAAGAAT
GTTCTTTGTACATCTTTAAAGAGTTGTGCTACTATTAGTTGTCAGTTATT
TAACATCTATGAATCTTACTCCCTTCATTTATGACATGAATTCACATGAA
ATCCCTCTCCTGGTCCTCATTGCGTTTCACAAGCTCAAGGCAACTAATGC
ATGTAGATGTTTGGAAGACAATATAGTACTTCCTATGGCTGATTATTACA
TTATGTTATACTTGAGCATCCTAATATCCTCCTACGTAGACTACCTGAAC
CTTCTCAAAGCTCAATGACCTTCCTTTCTCATTTCGGTGATCTTGCACCA
AGAAATCCTTTCGAAATATTAGTAATTTAACCCATATTGCCATTCTTCAG
TATCTCTTCC

Query= MSMg01no325_k19.b1 MSMg01no325_k19.b1 CHROMAT_FILE:
MSMg01no325_k19.b1 PHD_FILE: MSMg01no325_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:13 2005
         (642 letters)



>mm_chr9_27591748_27592788
          Length = 1041

 Score = 1141 bits (590), Expect = 0.0
 Identities = 629/642 (97%), Gaps = 1/642 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattccacacaatttccagtaaataaagagaaaacttcaaagacaatacaaaaattaaat 60
           ||||||||||||   | |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 aattccacacaaaaacaagtaaataaagagaaaacttcaaacacaatacaaaaattaaat 260

                                                                       
Query: 61  aaaattctttagagttgaacaagatgaattttgtgtatggaaaagtttattgacagctca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaattctttagagttgaacaagatgaattttgtgtatggaaaagtttattgacagctca 320

                                                                       
Query: 121 gtggccgagcatttgcctagtgtgtgagaagcctgacacagtgtatcttagccgactatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggccgagcatttgcctagtgtgtgagaagcctgacacagtgtatcttagccgactatc 380

                                                                       
Query: 181 aggcacacgggcattgttgctttcccgggagctgatagcttccatgcatctctttacaaa 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcacacgggcattgttgctttcctgggagctgatagcttccatgcatctctttacaaa 440

                                                                       
Query: 241 tatttcaaagggaaagcgaaatgattgattaggaggacaatagttaacactcataacact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatttcaaagggaaagcgaaatgattgattaggaggacaatagttaacactcataacact 500

                                                                       
Query: 301 gccaatcaaagatggactcattcaaacttcttgacagatttaacttgggttgatgggggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 501 gccaatcaaagatggactcattcaaacttcttgacagatttaacttgggttgatggggg- 559

                                                                       
Query: 361 aggagagcaccacccctggtggtgggctcagcaggagctaactcaacatccatcctctgt 420
           |||||||||  |   |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aggagagcagtagggctggtggtgggctcagcaggagctaactcaacatccatcctctgt 619

                                                                       
Query: 421 gttagtgagccagcaggtcaccttaacatcattacaattaagcaataggagagaagccac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttagtgagccagcaggtcaccttaacatcattacaattaagcaataggagagaagccac 679

                                                                       
Query: 481 gcccaggggaaacacatagcaggtaaaggggatgggtctggtggcttctgtctgggatat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 680 gcccaggggaaacacatagcaggtaaaggggatgggtctggtggcttctgtctgggatac 739

                                                                       
Query: 541 gattttccttcagcccaagtattaagcactggtaaccaggtaaaacaagaagaaattact 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gattttccttcagcccaagtattaagcactggtaaccaggtaaaacaagaagaaattact 799

                                                     
Query: 601 ttgataaaagtattttttaaattttaaaaatgtatggtgccg 642
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttgataaaagtattttttaaattttaaaaatgtatggtgccg 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space:   651592
Effective search space used:   651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)