Query= MSMg01no325_m22.b1 MSMg01no325_m22.b1 CHROMAT_FILE:
MSMg01no325_m22.b1 PHD_FILE: MSMg01no325_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:23 2005
(635 letters)
>mm_chr9_116316720_116317754
Length = 1035
Score = 1137 bits (588), Expect = 0.0
Identities = 621/632 (98%), Gaps = 1/632 (0%)
Strand = Plus / Plus
Query: 5 gaattccttcctatatgaccaatattgggtgtagctgtcactaaaataagcaatggctac 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcctatatgacaaatattgggtgtagctgtcactaaaataagcaatggctac 264
Query: 65 cagagactgtcacgttgacttcttctgaactttgatttattcattaaatgcttattgtag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagagactgtcacgttgacttcttctgaactttgatttattcattaaatgcttattgtag 324
Query: 125 tcttaatacatgccaagtctggttttgtttattttgcttttttaaaaaaattttaaaacc 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 tcttaatacatgccaagtctggttttgtttattttgcttttttaaaaaaaatttaaaacc 384
Query: 185 aatgaagagagtgaactatttggcatctgtcaagttgctttgctccttcaagaggctatt 244
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatgaagagcgtgaactatttggcatctgtcaagttgctttgctccttcaagaggctatt 444
Query: 245 attggactctggtacgtgataattttaaagcacaaatgacctatttttgtctgcttttat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attggactctggtacgtgataattttaaagcacaaatgacctatttttgtctgcttttat 504
Query: 305 ttctccttgttcaagtggcaccattaattgaattgggatacaaggtcaaagtgggatttt 364
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 505 ttctccttgttcaagtggcaccattaattgagttgggatacaaggtcaaaatgggatttt 564
Query: 365 taaaggtttaagcacataaaggttaaacagaggaagccacaaacaaa-ccttttctctaa 423
|||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 565 taaaggtttaagtaaataaaggttaaacagaggaagccacaaacaaaaccttttctctaa 624
Query: 424 atatccctgtgacatgaagcaatgtaccagagcaccgaatacaccaaggctttgtagagt 483
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atatccctgtgacatgaatcaatgtaccagagcaccgaatacaccaaggctttgtagagt 684
Query: 484 ttctatccagcatagcctgccagaacactgagttcccacaaagggtaggggtggattctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 685 ttctatccagcatagcctgccagaacactgagttcccacaaagggtaggggtggactctg 744
Query: 544 caaagagcagtgtgttctagtttcatttctgttgttgtgataagatagcctaacagaaag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caaagagcagtgtgttctagtttcatttctgttgttgtgataagatagcctaacagaaag 804
Query: 604 cagcttagggtaaggagggttcatatgggcta 635
|||||||||||||||| |||||||||||||||
Sbjct: 805 cagcttagggtaaggacggttcatatgggcta 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_m22.g1 MSMg01no325_m22.g1 CHROMAT_FILE:
MSMg01no325_m22.g1 PHD_FILE: MSMg01no325_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:23 2005
(333 letters)
>mm_chr9_116535799_116536531
Length = 733
Score = 615 bits (318), Expect = e-180
Identities = 329/333 (98%)
Strand = Plus / Minus
Query: 1 ggagctgagcgtatgtgcataaagaagttggtgctttttttaaaaaacaccttttggaat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 533 ggagctgagcgtatgtgcataaagaagttggtgctttttttaaaaaaaaccttttggaat 474
Query: 61 acatagatacttcgcttgcatcttaactttcacttttgctttgttgaaagatgaaaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 acatagatacttcgcttgcatcttaactttcacttttgctttgttgaaagatgaaaatga 414
Query: 121 acacaaccataaaaaaaaaacagttgatttttgttaatttattttaactaattgaagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acacaaccataaaaaaaaaacagttgatttttgttaatttattttaactaattgaagaat 354
Query: 181 agtgacaagcatggagaacttggaactttgagtctttggcatgtttggtggttaaagata 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agtggcaagcatggagaacttggaactttgagtctttggcatgtttggtggttaaagata 294
Query: 241 ttcattcagatagaaccaagaaggtctttgcaaagagcacatganacctggttcaggaaa 300
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 293 ttcattcagatggaaccaagaaggtctttgcaaagagcacatgaaacctggttcaggaaa 234
Query: 301 tgtgcaaaagaacccagggggcaattgaggctg 333
|||||||||||||||||||||||||||||||||
Sbjct: 233 tgtgcaaaagaacccagggggcaattgaggctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
