Query= MSMg01no326_j13.b1 MSMg01no326_j13.b1 CHROMAT_FILE:
MSMg01no326_j13.b1 PHD_FILE: MSMg01no326_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:20 2005
(599 letters)
>mm_chr9_20318195_20319188
Length = 994
Score = 1069 bits (553), Expect = 0.0
Identities = 588/601 (97%), Gaps = 7/601 (1%)
Strand = Plus / Plus
Query: 1 gcaacagagcctgtctctatctgccccctcctctcctgtctatctctctatctggctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 gcaacagagcctgtctctatctgccccctcctctcctgtctatctctctatctggctgt- 259
Query: 61 gctctgtctctctcatacacacacactggactgccttgtctgaaaggttacaaggtatca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 -ctctgtctctctcatacacacacactggactgccttgtctgaaaggttacaaggtatca 318
Query: 121 ggtatctgtgacctgcccgaatcccagtaggttcactggcaggatgcactcagtagtacc 180
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 319 ggtatctgtgacctgcc-gaatccc-gtaggttcactggcaggatgcactcagtagtacc 376
Query: 181 gagtgctcacctggcagctccaaggcctggcttcaccccttacacaaggtaaaggggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gagtgctcacctggcagctccaaggcctggcttcaccccttacacaaggtaaaggggatg 436
Query: 241 tgcttgagctgtttgcagtgcatcttggaattcctccctctactcaaactagcccttccc 300
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 437 tacttgagctgtttgcagtgcatcttggaattcctccctctactcaaa-tagcccttccc 495
Query: 301 ctccctgaagtagtacccatggtaacccagctcctggaacttttgatacccgctgacaca 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 496 ctccctgaagtagtacccatggtaacccagctcctggaacttttgataaatgctgacaca 555
Query: 361 ccctgggggctggaattattccatgggtaacaaccagaaatttcctttgccaagatcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccctgggggctggaattattccatgggtaacaaccagaaatttcctttgccaagatcaac 615
Query: 421 tgccagagggacctgaaggggccagacagctttaaaatgtccttatcaccttctgtatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgccagagggacctgaaggggccagacagctttaaaatgtccttatcaccttctgtatat 675
Query: 481 tctactcaaggatcccagggagcaagctagacatttctacttcaagtgatttaattaacg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 676 tctactcaaggatcccagggagcaagctagacatttctacttcaagtgatttaattaagg 735
Query: 541 aaaaaaaaaa--ttcctcacaagtatagccagaatcttgggttttagtcaattccaggtg 598
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aaaaaaaaaaatttcctcacaagtatagccagaatcttgggttttagtcaattccaggtg 795
Query: 599 t 599
|
Sbjct: 796 t 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 994
Length adjustment: 10
Effective length of query: 589
Effective length of database: 984
Effective search space: 579576
Effective search space used: 579576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_j13.g1 MSMg01no326_j13.g1 CHROMAT_FILE:
MSMg01no326_j13.g1 PHD_FILE: MSMg01no326_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:20 2005
(646 letters)
>mm_chr9_20514113_20515154
Length = 1042
Score = 1031 bits (533), Expect = 0.0
Identities = 590/611 (96%), Gaps = 7/611 (1%)
Strand = Plus / Minus
Query: 38 ggggct-gtgatgtgactcacttggcagagcacttgcctagcatgcagcaggccctgggc 96
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 ggggctggtgatgtgactcacttggcagagcacttgcctagcatgcagcaggccctgggc 983
Query: 97 tccatgcccagcgttggataaactgactgtggtagcacatgcctctgaccccagcatgta 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 tccatgcccagcgttggataaactgactgtggtagcacatgcctctgaccccagcatgta 923
Query: 157 aaaggatcaggagttcagggtcagcctcagctacatagtaaatttgaggtcagttagagc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 aaaggatcaggagttcagggtcagcctcagctacatagtaaatttgaggtcagttagagc 863
Query: 217 tacacaggcccagtctcaatccctctctcaatgcattttctgtttacatgtgtttatctg 276
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tacacaggcccagtctcaacccctctctcaatgcattttctgtttacatgtgtttatctg 803
Query: 277 gctgcataatatgtcaaagagcatctgtttgaccataggaggctcctgaacaaaggggag 336
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 802 gctgcataatatgtcaaagagcatctgtttgagcataggaggcccctgaacaaaggggag 743
Query: 337 ctcacacccacacagaattacatgcagtttcatatatgctcaaacagacccactaataca 396
|||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 742 ctcacagccacagagaattacatgcagtttcatatatccccaaacagacccactaataca 683
Query: 397 aacatggcttgtcctggagtcacgctgctccgcaggtgtccaggactgctcatggatgtg 456
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 682 aacatggcttgtcctggagtcacgctgctccgcacgtgtccaggactgctcacggatgtg 623
Query: 457 gtgttgcagatatgtctggaatgagtcatggtacgtccaagctggagaggtaccacggga 516
|||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 622 gtgttgcagatatgtctggaatgagtcatggtgcatccaagctggagaggtaccatggga 563
Query: 517 ggccatgcagttcctccggacctgctcctgactgtcctttgcaggcccctcatctct-ac 575
||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 562 ggccatgcagttca----gacctgctcctgactgtcctttgcaggcccctcatct-tcac 508
Query: 576 gcctttcttgttgcctgtttatagctctgggtttctgcagcttccaatccctgtggatct 635
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gcctttcttgttgcctatttatagctctgggtttctgcagcttccaatccctgtggatct 448
Query: 636 tcagctccata 646
|||||||||||
Sbjct: 447 tcagctccata 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1042
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1032
Effective search space: 656352
Effective search space used: 656352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
