Query= MSMg01no326_o13.b1 MSMg01no326_o13.b1 CHROMAT_FILE:
MSMg01no326_o13.b1 PHD_FILE: MSMg01no326_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:42 2005
(345 letters)
>mm_chr9_69430738_69431483
Length = 746
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%), Gaps = 1/345 (0%)
Strand = Plus / Plus
Query: 1 tgtgctgtaagaagccggcctgccccactcagtgctcccgctcctcagcttcattcttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgctgtaagaagccggcctgccccactcagtgctcccgctcctcagcttcattcttat 260
Query: 61 gtttcatctgcttatttaaaaaattttacttgtggtatctgggtggg-ttttttttttac 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gtttcatctgcttatttaaaaaattttacttgtggtatctgggtggggttttttttttac 320
Query: 120 atatgtatgggtgaacatgtgtttgtgggtggacataacatgcctatacatacattgaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgtatgggtgaacatgtgtttgtgggtggacataacatgcctatacatacattgaat 380
Query: 180 gtcttcctgggtctctcttctccatacacaggggcagagtctccaatttgcaccgagtcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcttcctgggtctctcttctccatacacaggggcagagtctccaatttgcaccgagtcc 440
Query: 240 actgattggtatcctccagccagccagcttgcttttgcgtttcttatctctgctttcctt 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgattgggatcctccagccagccagcttgcttttgcgtttcttatctctgctttcctt 500
Query: 300 ccaaaattacagggcaggtgggtattcatgcccacttgacattta 344
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaaaattacagggcaggtgggtattcatgcccacttgacattta 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 746
Length adjustment: 9
Effective length of query: 336
Effective length of database: 737
Effective search space: 247632
Effective search space used: 247632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_o13.g1 MSMg01no326_o13.g1 CHROMAT_FILE:
MSMg01no326_o13.g1 PHD_FILE: MSMg01no326_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:42 2005
(554 letters)
>mm_chr9_69588893_69589846
Length = 954
Score = 1011 bits (523), Expect = 0.0
Identities = 547/555 (98%), Gaps = 2/555 (0%)
Strand = Plus / Minus
Query: 1 tcctcattggtggagccattgggcagacacatttccacctggaggctgcccacataccct 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 754 tcctcattggtggagccattgggcggacacatttccacctggaggctgcccacataccct 695
Query: 61 tagctgggctttgagtttacacagaatgtgagcaatatcctgtactgatggagcttgagc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 694 tagctgggctttgagtttacacagaatgtgagcaatatcctgtactgatggagcttgatc 635
Query: 121 tgtgagcttgtgagattctgtgcctggctgtaagtggctgcgccagctcccttgctcgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgtgagcttgtgagattctgtgcctggctgtaagtggctgcgccagctcccttgctcgat 575
Query: 181 gttccactggctgggagcctgggattggtaaaggtccctgcgtgctcacgatacaaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gttccactggctgggagcctgggattggtaaaggtccctgcgtgctcacgatacaaccct 515
Query: 241 gaattcacatgcttagtttagttcttaattacatccattgatgttgaaaaacatttagtc 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattcacatgcttagtctagttcttaattacatccattgatgttgaaaaacatttagtc 455
Query: 301 caagaaagaaaccaaagggactttgggatcttagagttgcccacccgtcaggtttttata 360
||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 454 caagaaagaaaccaaagggactttgggatcttagagttgccaaactgtcaggtttttata 395
Query: 361 tcagggccactggagagatgttcacaggccagatggtatggtacaacatgtgttcccaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tcagggccactggagagatgttcacaggccagatggtatggtacaacatgtgttcccaag 335
Query: 421 gaggatggaccacattgcttatggaaagcctaaagccagtgtcaccctgagaagcctggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaggatggaccacattgcttatggaaagcctaaagccagtgtcaccctgagaagcctggg 275
Query: 481 ggtgactctgaggaatgggaaaccctgagtggctactctcaagtgcttgc-cagtgctat 539
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 274 ggtgactctgaggaatgggaaaccctgagtggctactctcaagtgctt-ctcagtgctat 216
Query: 540 ctcaggagaaggacc 554
|||||||||||||||
Sbjct: 215 ctcaggagaaggacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
