Query= MSMg01no327_i03.b1 MSMg01no327_i03.b1 CHROMAT_FILE:
MSMg01no327_i03.b1 PHD_FILE: MSMg01no327_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:25 2005
(249 letters)
>mm_chr9_52958513_52959161
Length = 649
Score = 327 bits (169), Expect = 4e-94
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 1 aaggcttatagaattctttatgataaaggggaaaccaaaatgctaaggtctaaatggaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcttatagaattctttatgataaaggggaaaccaaaatgctaaggtctaaatggaca 260
Query: 61 ctaaatactaactaatactaaagggagtccatggagcttttagatgcttctgattacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaatactaactaatactaaagggagtccatggagcttttagatgcttctgattacatc 320
Query: 121 acagatgaaatctaccagaaaatgagaacctactaaactagattctaag 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagatgaaatctaccagaaaatgagaacctactaaactagattctaag 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no327_i03.g1 MSMg01no327_i03.g1 CHROMAT_FILE:
MSMg01no327_i03.g1 PHD_FILE: MSMg01no327_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:25 2005
(600 letters)
>mm_chr9_53131078_53132077
Length = 1000
Score = 891 bits (461), Expect = 0.0
Identities = 513/535 (95%), Gaps = 9/535 (1%)
Strand = Plus / Minus
Query: 2 tttgttccatgacctgactcagtgctggcacctagctaaagtttttaaaaatgtcttttc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tttgttccatgacctgactcagtgctggcacctagctaaagtttttaaaaatgtcttttc 467
Query: 62 ggctagggagaaaagccatttcaaccacaatgagctttaacattcctaatgatggtacga 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agctagggagaaaagccatttcaaccacaatgagctttaacattcctaatgatggtacga 407
Query: 122 agacactgagaaattgaatatctattggtggataaagatgggtatagcctgtcgtgtata 181
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 406 agacactgagaaattgaatatctattggtggataaagatgggtataacctgtcatgtata 347
Query: 182 gtagaaagccaagactcttgatttagggtcacaaaggagggtacgattcattcttgctaa 241
| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 346 ggagaaagccaagactcttgatttagggtcacaaaggaggataggattcattcttgctaa 287
Query: 242 tatgaagatggtcctttcaaggcagaagcagtcttactggggtctgaactcagttagagg 301
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 286 tatgaagatggtcctttcaaggcagaagcagtcttactggtgtctgaactcagttagagg 227
Query: 302 aagcatctgaagctgcttgtggttgtgtggttgccagccatgacattcactcacagtgat 361
||||||||||| |||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 226 aagcatctgaaactgcctgtggttg--------ccagccatgatattcactcacagtgat 175
Query: 362 tgcaaagtattttagttgtcctgtcaaccactcgctcataggagatccccagcattctgg 421
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 174 tgcaaagtattttagttgtcctgtcaaccactcactcataggagatccccagcattctga 115
Query: 422 gaaattgctttctggagcaaccgagtcaacagaaagccagaaattggagaaagatgctac 481
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 114 -aaattgctttctggagcaactgagtcaacagaaagccagaaattggagaaagatgctac 56
Query: 482 aaaacctctaacatgtgggaagtgtgtcagaggttactgaatttctatttaaaat 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 aaaacctctaacatgtgggaagtgtgtcagaggttactgaatttctatttaaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
