Query= MSMg01no328_h14.b1 MSMg01no328_h14.b1 CHROMAT_FILE:
MSMg01no328_h14.b1 PHD_FILE: MSMg01no328_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:38 2005
(319 letters)
>mm_chr9_29761609_29762328
Length = 720
Score = 549 bits (284), Expect = e-161
Identities = 308/316 (97%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgggtcacc-gatggttgtgtgggttacccagtgactaagcttggctccaat 63
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttggggcaccagatggttgtgtgggttacccagtgactaagcttggctccaat 264
Query: 64 ctgcaccgtcgttctgtaacccatgcgcctcgcagatctgctgactccatcagaaaacaa 123
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgcacagtcgttctgtaacccatgcgcctcgcagatctgctgactccatcagaaaacaa 324
Query: 124 acaagctcttgctcctgttcgtggccggcagaaactgacctggcatagaaatcagagcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaagctcttgctcctgttcgtggccggcagaaactgacctggcatagaaatcagagcca 384
Query: 184 acatctcagcaatctaacaaatgaagccccatgactgctgtttatttgctggggatgtgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acatctcagcaatctaacaaatgaagccccatgactgctgtttatttgctggggatgtgt 444
Query: 244 ttccctcgaccccaggaaggagagagcaccacgttattgctgaatgattgcttgggaagg 303
||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 445 ctcccttgaccccaggaaggagagagcaccacgggatcgctgaatgattgcttgggaagg 504
Query: 304 aaagcaaagtttggag 319
||||||||||||||||
Sbjct: 505 aaagcaaagtttggag 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_h14.g1 MSMg01no328_h14.g1 CHROMAT_FILE:
MSMg01no328_h14.g1 PHD_FILE: MSMg01no328_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:38 2005
(240 letters)
>mm_chr9_29913002_29913641
Length = 640
Score = 449 bits (232), Expect = e-131
Identities = 238/240 (99%)
Strand = Plus / Minus
Query: 1 cagtgcagggtgtgatggactcaaaatgtcggctcttttatgtgctagcattctgaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cagtgcagggtgtgatggactcaaaatgtcggctcttttatgtgctagcattctgaatca 381
Query: 61 gttcgttgtcactctctcttcttgactgggtccagaaggatgtgaaattggctggaattg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 gttcgttgtcactctctcttcttggctgggtccagaaggatgtgaaattggctggaattg 321
Query: 121 caattgagatttgaggcagacatgtcagaggacttcctgacctgcagggcaccaatgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caattgagatttgaggcagacatgtcagaggacttcctgacctgcagggcaccaatgtga 261
Query: 181 gagaatgaagttatgtctgtcatactcgctctttgtctctgtgtctctcccttgctcttt 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 260 gagaatgaagttatgtctgtcatactcgctctttgtctctgtgcctctcccttgctcttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
