TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCANGAGTCCGCG
GAATTCCACAGAGAATTTCCCGAAAATGGCTGGGCTACACTCAAAGAGGA
ATGAACTCCCTACAAGGCTAAAGGACACAGCAGCGCTGTGTACACAGGCA
GCCCTGGCAGGCCTCTAGCTCTCAGAAGCCGTCTCTAAAGCTCAGTCAGT
AGTAACATGTCTGCCACACAAACACCCACATAAAACTCCCCAGAACCCAC
ATAAAAAATCTATGTGCACACCTGTAATGCCACGCTGAAGAGGTGGAGAC
AGGAGAATCACCTGAGCCATCGCGCTGATTCAGGGGGCTCTGTGAGAGAT
CCTGCCTCAGGGGTGGTGTGATGGCGCTCATGGTGGGGTGCCTCCACAGA
TAAAGGGGTCTGTCATTATACCCCACCACCTGAATCCAATGCTCAGACCC
CAGTGGTGGAAGAAGAGACCTTCCACAAGAAGTTTTCAGATCTCCATTGC
TGTTGTGGCATCCCTTCCCCCCTACATATACACAAAAAAATAAAAGCCTA
AGAAAAACTCTTTACTCATGTGGAGAATACCTTGAGAAGAAACCCATTGC
TGAGGCCTTCTGTCTGCTCCCCTGTTGCAACCCACCTCCTGTGCAAACAT
TGCCGATGTTCTTCATACTTACTTACATTTTGACTTTTCTCGCCTTGGCG
TACCGGCCTAAATTCCTAAATTGTTCACCCCCCCCTTTTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTGTTCACAACCCAGTAACACAGTCCTAACCCACATC
TGCTTAGCAAACTTTCATCACACACACACACACACTGAGCGAGAAAGGAA
AGCTGTATACAAGAAGGCGTCTGCACAGTAGCAGTTCTCTCCGTCTCTCT
GTCTCTGTCTCTGTCTCTCTCACACACACACTCACTCATATAGGCACTGG
CAATAGCCCTTAGACATCGGATGCCATGACACACCTTGAAGGGTTCTCCA
GGAACCATGCCCACACAGGTCATTAGCCAAGCGCCTGGCTCACGCGTCCC
ATGCATCCTGCTGCACTGTGCCGTCTGGGGCTGGAGCACACTCTTTCTAA
GCTCCACGTTCATCCTCTTTGTGAACCCTGAGCTCTGCCGCAGGCACCTG
TCTCTGGTGACTCTGTGACTCTATTTCACTCTCTGCAGCAGGGACTATAC
TCCCAGGGACCCATTGCAGATCACCCATGCCTCAGAGTAAGAAGGCACAC
GTTCATGGAACTGGAAAGGCAGATCAGTGTGGTTAAGAGCTTGCACCATT
TTTGCAGAGGACAAGGTTCTGTTCCCAGCACCCACACTCGTTTGTGCACC
ACTGCCTGTAACTCCAGCACCAGAGGCTCCAATGCCCTCTTCTGAGGGTG
CTACACTCACACAGTGAATGTAAACTCATGCAAACACAAACAC

Query= MSMg01no331_k19.b1 MSMg01no331_k19.b1 CHROMAT_FILE:
MSMg01no331_k19.b1 PHD_FILE: MSMg01no331_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:36 2005
         (336 letters)



>mm_chr9_121238169_121238904
          Length = 736

 Score =  555 bits (287), Expect = e-162
 Identities = 308/315 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatggctgggctacactcaaagaggaatgaactccctacaaggctaaaggacacagcagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aatggctgggctacactcaaagaggaatgaactccctacaaggctaaaggacacagcagc 256

                                                                       
Query: 61  gctgtgtacacaggcagccctggcaggcctctagctctcagaagccgtctctaaagctca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gctgtgtacacaggcagccctggcaggcctctagctctcagaagccgtctctaaagctca 196

                                                                       
Query: 121 gtcagtagtaacatgtctgccacacaaacacccacataaaactccccagaacccacataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gtcagtagtaacatgtctgccacacaaacacccacataaaactccccagaacccacataa 136

                                                                       
Query: 181 aaaatctatgtgcacacctgtaatgccacgctgaagaggtggagacaggagaatcacctg 240
           |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 135 aaaatctaagtgcacacctgtaatgccacactgaagaggtggagacaggagaatcacctg 76

                                                                       
Query: 241 agccatcgcgctgattcagggggctctgtgagagatcctgcctcaggggtggtgtgatgg 300
           |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 75  agccattgcgctgagtcagggggctctgtgagagatcctgcatcaggggtggtgtaatgg 16

                          
Query: 301 cgctcatggtggggt 315
            ||||||||||||||
Sbjct: 15  tgctcatggtggggt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space:   237729
Effective search space used:   237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no331_k19.g1 MSMg01no331_k19.g1 CHROMAT_FILE:
MSMg01no331_k19.g1 PHD_FILE: MSMg01no331_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:36 2005
         (595 letters)



>mm_chr9_121042221_121043215
          Length = 995

 Score = 1127 bits (583), Expect = 0.0
 Identities = 592/595 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgttcacaacccagtaacacagtcctaacccacatctgcttagcaaactttcatcacaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttcacaacccagtaacacagtcctaacccacatctgcttagcaaactttcatcacaca 260

                                                                       
Query: 61  cacacacacactgagcgagaaaggaaagctgtatacaagaaggcgtctgcacagtagcag 120
           |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 261 cacacacacactgagcgagaaagggaagctgtatacaagatggcgtctgcacagtagcag 320

                                                                       
Query: 121 ttctctccgtctctctgtctctgtctctgtctctctcacacacacactcactcatatagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctctccgtctctctgtctctgtctctgtctctctcacacacacactcactcatatagg 380

                                                                       
Query: 181 cactggcaatagcccttagacatcggatgccatgacacaccttgaagggttctccaggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactggcaatagcccttagacatcggatgccatgacacaccttgaagggttctccaggaa 440

                                                                       
Query: 241 ccatgcccacacaggtcattagccaagcgcctggctcacgcgtcccatgcatcctgctgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatgcccacacaggtcattagccaagcgcctggctcacgcgtcccatgcatcctgctgc 500

                                                                       
Query: 301 actgtgccgtctggggctggagcacactctttctaagctccacgttcatcctctttgtga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgtgccgtctggggctggagcacactctttctaagctccacgttcatcctctttgtga 560

                                                                       
Query: 361 accctgagctctgccgcaggcacctgtctctggtgactctgtgactctatttcactctct 420
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 accctgagctctgccgcaggcacctgtctctggtggctctgtgactctatttcactctct 620

                                                                       
Query: 421 gcagcagggactatactcccagggacccattgcagatcacccatgcctcagagtaagaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcagcagggactatactcccagggacccattgcagatcacccatgcctcagagtaagaag 680

                                                                       
Query: 481 gcacacgttcatggaactggaaaggcagatcagtgtggttaagagcttgcaccatttttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcacacgttcatggaactggaaaggcagatcagtgtggttaagagcttgcaccatttttg 740

                                                                  
Query: 541 cagaggacaaggttctgttcccagcacccacactcgtttgtgcaccactgcctgt 595
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagaggacaaggttctgttcccagcacccacactcgtttgtgcaccactgcctgt 795


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)