Query= MSMg01no333_f13.b1 MSMg01no333_f13.b1 CHROMAT_FILE:
MSMg01no333_f13.b1 PHD_FILE: MSMg01no333_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:30 2005
(344 letters)
>mm_chr9_40859637_40860380
Length = 744
Score = 665 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Minus
Query: 1 catgtgagttttattccctgcacccagagtgggagcaggatgtgaacccagatctctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 catgtgagttttattccctgcacccagagtgggagcaggatgtgaacccagatctctgtg 485
Query: 61 gctctgacagacctggccttgcagggctcactgtagagagtctcctgtagctactggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gctctgacagacctggccttgcagggctcactgtagagagtctcctgtagctactggccc 425
Query: 121 atcaggagggctttgagcagtctcgccagaagtaactggtagtagcacctcctggctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atcaggagggctttgagcagtctcgccagaagtaactggtagtagcacctcctggctctg 365
Query: 181 tttttccccaaagatgtctgtaaaataattagtgatgatggatccccctgggtcactggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tttttccccaaagatgtctgtaaaataattagtgatgatggatccccctgggtcactggg 305
Query: 241 catggaaaaagaagaggaatcacttcctttatgagtttatgcaagtgtccttgtagctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 catggaaaaagaagaggaatcacttcctttatgagtttatgcaagtgtccttgtagctat 245
Query: 301 ttagcacggcatcttcatgtccttcctcacccattccatcaagg 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttagcacggcatcttcatgtccttcctcacccattccatcaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_f13.g1 MSMg01no333_f13.g1 CHROMAT_FILE:
MSMg01no333_f13.g1 PHD_FILE: MSMg01no333_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:30 2005
(245 letters)
>mm_chr9_40685382_40686025
Length = 644
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 aattcagtagacagcgagccccccccccccaagctccaccgatcacccagacctttcagt 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 aattcagtagacagcgagccccccccccc-aagctccaccgatcacccagacctttcagt 259
Query: 61 caccgtttgtgtgaggaatgatatgatcttgtttgtctccccgacatcaggtgaaaacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caccgtttgtgtgaggaatgatatgatcttgtttgtctccccgacatcaggtgaaaacgt 319
Query: 121 ggttccagaaccggcggatgaagcataaaaagcagctgaggaaaagccaagacgaaccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggttccagaaccggcggatgaagcataaaaagcagctgaggaaaagccaagacgaaccga 379
Query: 181 aagcggcagacgggccggagagccccgaaggcagccctcgtgctcccgagggcgcgcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagcggcagacgggccggagagccccgaaggcagccctcgtgctcccgagggcgcgcccg 439
Query: 241 ccgac 245
|||||
Sbjct: 440 ccgac 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 644
Length adjustment: 9
Effective length of query: 236
Effective length of database: 635
Effective search space: 149860
Effective search space used: 149860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
