TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGGCTTTTAACAGTATCGTTGATGTCTTAAAATCCATGAGAAAACA
CTGGTATTCCAGCTGTTGTTAAAGTTCATCTAAAAAGGCTATTCTTGACT
AGAGGAACCCATCCATCCACTCCCTCCCCTTCCTGCAGATCTCACCAAAG
GTTTTGAAACCAGGCAAAGTCCACCTTTGGAGCACAACACCCTGAAAGGG
TAGTTTCTGGTTTTCATGTTGTGGTTGTCATAAGTGTGGAATTTGTTCTG
GTTTTTGTTGTACTGATCACTGAGGTTTGAATGAAAATTTTCCCCATAGA
CTGAGATATTAGAATACTTGGTGGGTCCATTTGGGGAGGCTGTAGAATCT
CTAGAAGTCAGAGTCTTGTTCAGGAAAGTCATTGTGGGAGGGGTGAATTA
CCATTAAGGGTATTAGTCTTGCTTCACTTCCTGTATACTCTGTACTTGGT
GCTCATGGTTGAGAAGTGACCTCTGAACTTCCTGCTCCTGCCTGTACCCC
TGCCTTTTACCATCATGCCTCCATTCCACGATGGGCTATCAATTTCTGGA
ACCATAGAACAGGTAAACTCTTCAGTTTATGTAAGTTGCCTTGGTCGTGG
TGCTTTATCACAGCAGCAGCATAGTAACAAATGCACTTGGTATCAAACAC
AGGAACTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAA
GACAACCAAGCCCATGATAAGCTCAAGGACTTTCTAGGATGTTATATCCT
GTCCCATGCTAAGACTACTATTTTGCTCTGACAAAGCTATGGAAATATTC
CTATGCTTATCATTAACAAAATGGGCAGTATGTAGCTGCTGATCTAAAGC
TATGGTAGATACATTTTTAAAGTTTGAATTCTCATATTTTTAAACCAAGG
ATCATTTTCTAACTCTAACAGGCAGCAAAACATAAGCAGGTCTCTTACAT
TAACTTATTAGTAGATTCCTTATCTAAATTAGGATCTACACAATTATTTA
ATTGACACGAATTACAATGAATATAAAAAGACTTGCCAAGATCGGCGATC
TTAACTCTTAAAATTATCTAACAATAAGCATATAGGTAAGGTACACAAAC
TTTCATAGCTATAAGGAGCTGGCCTGAATGGCCAAAAACAGTGTCTCTGA
CGAAAGCATCTTGTACATTCTCTGTACCAGTCTTTTTGCCTCACGAGGTT
TTTTAGTTGTTTGTATTTTAAGTTGGCACCAGGTTGGTACTCCTTGCTGC
AGCCCATGTTGGAAATACGAAGTTTCTTTATCTGTTTGTAAGTGGCTGCT
CCCCGATTTCTCCTCTTTTGTGGACTCTACACCGTTTTCTG

Query= MSMg01no334_h13.b1 MSMg01no334_h13.b1 CHROMAT_FILE:
MSMg01no334_h13.b1 PHD_FILE: MSMg01no334_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:55 2005
         (544 letters)



>mm_chr9_9211273_9212216
          Length = 944

 Score = 1044 bits (540), Expect = 0.0
 Identities = 543/544 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgatgtcttaaaatccatgagaaaacactggtattccagctgttgttaaagttcatcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgatgtcttaaaatccatgagaaaacactggtattccagctgttgttaaagttcatcta 260

                                                                       
Query: 61  aaaaggctattcttgactagaggaacccatccatccactccctccccttcctgcagatct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaggctattcttgactagaggaacccatccatccactccctccccttcctgcagatct 320

                                                                       
Query: 121 caccaaaggttttgaaaccaggcaaagtccacctttggagcacaacaccctgaaagggta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccaaaggttttgaaaccaggcaaagtccacctttggagcacaacaccctgaaagggta 380

                                                                       
Query: 181 gtttctggttttcatgttgtggttgtcataagtgtggaatttgttctggtttttgttgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtttctggttttcatgttgtggttgtcataagtgtggaatttgttctggtttttgttgta 440

                                                                       
Query: 241 ctgatcactgaggtttgaatgaaaattttccccatagactgagatattagaatacttggt 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgatcacagaggtttgaatgaaaattttccccatagactgagatattagaatacttggt 500

                                                                       
Query: 301 gggtccatttggggaggctgtagaatctctagaagtcagagtcttgttcaggaaagtcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggtccatttggggaggctgtagaatctctagaagtcagagtcttgttcaggaaagtcat 560

                                                                       
Query: 361 tgtgggaggggtgaattaccattaagggtattagtcttgcttcacttcctgtatactctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgggaggggtgaattaccattaagggtattagtcttgcttcacttcctgtatactctg 620

                                                                       
Query: 421 tacttggtgctcatggttgagaagtgacctctgaacttcctgctcctgcctgtacccctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacttggtgctcatggttgagaagtgacctctgaacttcctgctcctgcctgtacccctg 680

                                                                       
Query: 481 ccttttaccatcatgcctccattccacgatgggctatcaatttctggaaccatagaacag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccttttaccatcatgcctccattccacgatgggctatcaatttctggaaccatagaacag 740

               
Query: 541 gtaa 544
           ||||
Sbjct: 741 gtaa 744


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)