Query= MSMg01no335_a15.b1 MSMg01no335_a15.b1 CHROMAT_FILE:
MSMg01no335_a15.b1 PHD_FILE: MSMg01no335_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:40 2005
(476 letters)
>mm_chr9_69810006_69810881
Length = 876
Score = 650 bits (336), Expect = 0.0
Identities = 360/368 (97%)
Strand = Plus / Minus
Query: 1 acaggggttccgagacccaaactcagctcttctgtaaaagcaagtgctcttaactcctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 acaggggttccgagacccaaactcagctcttctgtaaaagcaagtgctcttaactcctga 768
Query: 61 gcatttactccggccccctttttatgttatattgagactggttcttactctgtagcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gcatttactccggccccctttttatgttatattgagactggttcttactctgtagcccag 708
Query: 121 gatgccctgggggctcactatgtagtctaggctggccttgaacctgaggttgttctccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gatgccctgggggctcactatgtagtctaggctggccttgaacctgaggttgttctccca 648
Query: 181 cttcggctctctgagaaccaggatcacaccgttgctaccagtgctccctgagcaccagga 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 647 cttcggctctctgagaaccaggatcacaccattgctaccagtgctccctgagcaccagga 588
Query: 241 tcacaccactgcaaccaatgctctctgagcaccaggatcacaccattgctaccagtgctc 300
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 587 tcacaccattgcaaccaatgctctctgagcaccaggatcacaccattgccaccagtgctc 528
Query: 301 cctgagcaccaggatcacaccactgcaaccaatgctctctgagcaccaggatcacaccat 360
|| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 527 ccagagcaccaggatcacaccattgcaaccaatgttctctgagcaccaggatcacaccac 468
Query: 361 tgccacca 368
||| ||||
Sbjct: 467 tgcaacca 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_a15.g1 MSMg01no335_a15.g1 CHROMAT_FILE:
MSMg01no335_a15.g1 PHD_FILE: MSMg01no335_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:40 2005
(413 letters)
>mm_chr9_69673873_69674685
Length = 813
Score = 741 bits (383), Expect = 0.0
Identities = 401/413 (97%), Gaps = 10/413 (2%)
Strand = Plus / Plus
Query: 1 tgccaaggtgtacctctttcctagccaaggaaacaagcgcacacagcttgtcacacatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccaaggtgtacctctttcctagccaaggaaacaagcgcacacagcttgtcacacatag 260
Query: 61 cgggaaatgagcagtagcgtgctgtgggcctgcgaaacccttcagaagagatctgaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgggaaatgagcagtagcgtgctgtgggcctgcgaaacccttcagaagagatctgaggac 320
Query: 121 ttggaaccatctgactgaagaggaagcatgtccattgcctagtgagcgctgggctctggc 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ttggaaccatctgactgaagaggaagcatggccattgcctagtgagcgctgggctctggc 380
Query: 181 ttcagcaaaatacagcaaaataagtaaacaaacctccccaccacaaacaaaaaccatcgg 240
|||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagcaaaata----------agtaaacaaacctccccaccacaaacaaaaaccatcgg 430
Query: 241 gaataggcaaatcttgtgacttttcccccaaccaatccccctcccctaaaaccagaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaataggcaaatcttgtgacttttcccccaaccaatccccctcccctaaaaccagaaatt 490
Query: 301 aaataatggaaaaataatgtagaacaatatccaaccaggaaatatatagccaaaagtgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaataatggaaaaataatgtagaacaatatccaaccaggaaatatatagccaaaagtgtt 550
Query: 361 taaatgaacacagaaggcagccagagagacggaggagttcttgttgttctgga 413
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 taaatgagcacagaaggcagccagagagacggaggagttcttgttgttctgga 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
