TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGACCCAAAATGAATGGCTGAGAAGCACCTGAAAAAATGTT
CACCATCCTTAATCATCAGGGAAATGCAAATCAAAACAGCCCTGAAATTC
CACCTCACACCAGTTGGAATGGATAAGATCAAAATTTCAGGTGTCAGCAG
ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTTCTCCATTGTTAGTGGG
ATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGA
AAATTGGACATAGTACTACCAGAGGATCCTGCAATACTTCTCCTGGGCAT
ATATCTAGAAGATATTCCAACTGGGTAGAAGGACACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGC
CCCTCAACAGAGGAATGGATTTAGAAAATGTGGTATATTTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAAT
GGATGGACCTGGAGGGCATCGTCCTGAGTGAGTTTACCCAGTCACAAAAG
AACTCACATGATATGTACTCACTGATAAGTGGATATTAGCCAAGAAACTT
ATGATACCCCAGATATAAGATACAATTTGGCAAACATATGAAACTCCAGA
GAAACAAAAACCAAGTGTGGGAACTTGCCCCTTCT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGAGGTAGGAAATAGAACTCTCTGTGTT
CAGTTATCAGACCTGACAAGAGGTCTTCCTGTAAGAAAGGAAGATGTGGC
TCCCTGAATCATTTCCAGGTGTAAAAATGCAGTACAGACCATCATCTCTT
AAGTAATACCAATTGTACACCCTGCAGGATATTCCCCCAGGACATCTAGC
CCTTGCATGGATTTATTACTATCTTGTTGGGAAGGAGAGCAGTGATTGAC
AATGGTTCTGTTCATAAATCCCAAGTGGTGTATAATTTGGTTTTCTAATT
GTGCATGTTTGCATAGTCTGCTTCCTCCATCTGGATTGCAGAGTGAAGTG
CTCATCAGTAATGGCTTAGATCTGCTGTATGTCTCCAGTAGGGACAAGTT
TGCACATTCTCAGCCTTAACAGAAGTTTTAGGATCCAAACATCATGGAGG
AGATTCAGAGAAGCAAAGATACAGAGTTTCCCTCACAAAGCCATGCAGAA
AGGCAGAANAATTTCCTTTGAAAAAGGACTTATATTATTTGTGCATGTGT
GTGTGTATGTGTGTACAGTCTCTGTGGCCAGAAAAGGGTTCTGAAGCTGG
AGAAGAGTTATAGTGCTGAGGAATACAGCAATCCTCTATAGGAACAGAAG
TGTCTTTCTTGTTGAGCCCTCTCTCTACCCTGAGAATCT

Query= MSMg01no336_h13.g1 MSMg01no336_h13.g1 CHROMAT_FILE:
MSMg01no336_h13.g1 PHD_FILE: MSMg01no336_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:32 2005
         (483 letters)



>mm_chr9_6855186_6856072
          Length = 887

 Score =  895 bits (463), Expect = 0.0
 Identities = 478/485 (98%), Gaps = 4/485 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   aggtaggaaatagaactctc----tgtgttcagttatcagacctgacaagaggtcttcct 58
           ||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||
Sbjct: 687 aggtaggaaatagaactctctgtttgtgttcagttatcagacctgacaagaggtcttcct 628

                                                                       
Query: 59  gtaagaaaggaagatgtggctccctgaatcatttccaggtgtaaaaatgcagtacagacc 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtaagaaaggaagatgtggctccctgaatcatttccaggtgtaaaaatgcagtacagacc 568

                                                                       
Query: 119 atcatctcttaagtaataccaattgtacaccctgcaggatattcccccaggacatctagc 178
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 567 atcatctcttaagtaataccaattgtacaccctgtaggatattcccccaggacatctagc 508

                                                                       
Query: 179 ccttgcatggatttattactatcttgttgggaaggagagcagtgattgacaatggttctg 238
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 507 ccttgcatggatttattactatcttgttgggaaggagggcagtgattgacaatggttctg 448

                                                                       
Query: 239 ttcataaatcccaagtggtgtataatttggttttctaattgtgcatgtttgcatagtctg 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttcataaatcccaagtggtgtataatttggttttctaattgtgcatgtttgcatagtctg 388

                                                                       
Query: 299 cttcctccatctggattgcagagtgaagtgctcatcagtaatggcttagatctgctgtat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cttcctccatctggattgcagagtgaagtgctcatcagtaatggcttagatctgctgtat 328

                                                                       
Query: 359 gtctccagtagggacaagtttgcacattctcagccttaacagaagttttaggatccaaac 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtctccagtagggacaagtttgcacattctcagccttaacagaagttttaggatccaaac 268

                                                                       
Query: 419 atcatggaggagattcagagaagcaaagatacagagtttccctcacaaagccatgcagaa 478
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 267 atcatggaggagattcagagaagcaaagatacagagtttctctcacaaagccatgcagaa 208

                
Query: 479 aggca 483
           |||||
Sbjct: 207 aggca 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 887
Length adjustment: 10
Effective length of query: 473
Effective length of database: 877
Effective search space:   414821
Effective search space used:   414821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)