Query= MSMg01no337_f12.b1 MSMg01no337_f12.b1 CHROMAT_FILE:
MSMg01no337_f12.b1 PHD_FILE: MSMg01no337_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:42 2005
(617 letters)
>mm_chr9_89408806_89409822
Length = 1017
Score = 690 bits (357), Expect = 0.0
Identities = 381/389 (97%), Gaps = 3/389 (0%)
Strand = Plus / Minus
Query: 230 cctcaagttcttgcctggcaccccttcatggtggaccctttggatatgatatgaaataaa 289
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 1017 cctcaagttcttgcctggcaccccttcatggtggaccctttggatgtgagatgaaataaa 958
Query: 290 cttattcccctccaagttgcagtagggttacaggttctgccaccccactctgattttttt 349
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 957 cttattcccctccaagttgcattagggttacaggttctgccaccccactctga-tttttt 899
Query: 350 ttaaggtgagttttgggagttgaagtcatgtcctcttgtttgcatagcaagcactttact 409
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 898 ttaaggtgagttttgggagttgaagtcatgtcctcttgtttgcatggcaagcactttact 839
Query: 410 aagtaagcaaacccccagccctacttcttggtagtctctgagacctggattcatactccc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 aagtaagcaaacccccagccctacttcttggtagtctctgagacctggattcatactccc 779
Query: 470 tttaacactactagctgaagcttaacacactagcaaactgcatttcagagcattcttatg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 778 tttaacactactagctgaagcttaacacactagcaaactgcatttcagagcattcttgtg 719
Query: 530 acttana-ggttcaatatataagaactcaggtcttctttatctattgtgggaacttcttc 588
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 actta-agggttcaatatataagaactcaggtcttctttatctattgtgggaacttcttc 660
Query: 589 ccattgtgtggtctcttgctcactatgtc 617
|||||||||||||||||||||||||||||
Sbjct: 659 ccattgtgtggtctcttgctcactatgtc 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_f12.g1 MSMg01no337_f12.g1 CHROMAT_FILE:
MSMg01no337_f12.g1 PHD_FILE: MSMg01no337_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:42 2005
(228 letters)
>mm_chr9_89212252_89212879
Length = 628
Score = 426 bits (220), Expect = e-124
Identities = 227/230 (98%), Gaps = 2/230 (0%)
Strand = Plus / Plus
Query: 1 atgtggaaactgtagtgacacaaaatctgttgtgttcgtctaaaagaaatggactgacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtggaaactgtagtgacacaaaatctgttgtgttcgtctaaaagaaatggactgacta 260
Query: 61 aattctgtagaggctcctccagtagagtcatgtcttttcctggagcatccctcaacttga 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattctgtagaggcccctccagtagagtcatgtcttttcctggagcatccctcaacttga 320
Query: 121 gagtggatgtagtgcctagtttccaagaccaaggaggtttctggcaagctactggcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtggatgtagtgcctagtttccaagaccaaggaggtttctggcaagctactggcaaga 380
Query: 181 aaaatcaggacatgtcttgggtggggggctggtggggaggggg--ggtga 228
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 aaaatcaggacatgtcttgggtggggggctggtggggagggggaaggtga 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
