Query= MSMg01no337_j15.b1 MSMg01no337_j15.b1 CHROMAT_FILE:
MSMg01no337_j15.b1 PHD_FILE: MSMg01no337_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:02 2005
(702 letters)
>mm_chr9_23418310_23419411
Length = 1102
Score = 491 bits (254), Expect = e-143
Identities = 269/274 (98%)
Strand = Plus / Minus
Query: 429 caatagtcactgtgaatttattaacctctttttaccaattttacatatttttgaatttta 488
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 caatggtcactgtgaatttattaacctctttttaccaattttacatatttttgaatttta 848
Query: 489 ataaaccttttgatgactgaagttagttttgtgaaagtgtaagtcgtgttatacaagcta 548
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 847 ataaaccttttgatgactgaagttagttttgtgaaagtgtaagtcatgttatacaagcta 788
Query: 549 ccagagtttctgagatcactacataaaggcacagaaatgtattctcagatgaatgctctc 608
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ccagagtttctgaggtcactacataaaggcacagaaatgtattctcagatgaatgctctc 728
Query: 609 tgtggttctcagatgaaaattttttgctacagaaaatgttgtatttgaatgcttaggttc 668
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 727 tgtggttctcagatgaaactttcttgctacagaaaatgttgtatttgaatgcttaggttc 668
Query: 669 ttctttaaagactaaatgattctttggaactgaa 702
||||||||||||||||||||||||||||||||||
Sbjct: 667 ttctttaaagactaaatgattctttggaactgaa 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no337_j15.g1 MSMg01no337_j15.g1 CHROMAT_FILE:
MSMg01no337_j15.g1 PHD_FILE: MSMg01no337_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:02 2005
(587 letters)
>mm_chr9_23258772_23259759
Length = 988
Score = 1129 bits (584), Expect = 0.0
Identities = 587/588 (99%), Gaps = 1/588 (0%)
Strand = Plus / Plus
Query: 1 cctagacattaccgctcctactcaggtatcgttggcctttgggaaaactgtttttaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctagacattaccgctcctactcaggtatcgttggcctttgggaaaactgtttttaaagc 260
Query: 61 tgcttctctcccttgctcccctgaagttccccagttgcgaacatgtgtaatttgtaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttctctcccttgctcccctgaagttccccagttgcgaacatgtgtaatttgtaaact 320
Query: 121 actgaaattatgagctttaattttgaaattttatgaaaattattttgagggtt-ggggag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 actgaaattatgagctttaattttgaaattttatgaaaattattttgagggtttggggag 380
Query: 180 ctcagttttagaggctataattttaataataatgacagtggtggctttgaacttactggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcagttttagaggctataattttaataataatgacagtggtggctttgaacttactggc 440
Query: 240 acatcttgatcatttcacctcgacactgaggcaagatattcatagtactaaataaaggtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatcttgatcatttcacctcgacactgaggcaagatattcatagtactaaataaaggtt 500
Query: 300 aatattaaatttgctatagaatatccattaacatgagtgtattaatattaagattttttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatattaaatttgctatagaatatccattaacatgagtgtattaatattaagattttttt 560
Query: 360 ctgtaaatatttttatttgaacccatacttgcattcctaaaaggaacactgcttggtcat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtaaatatttttatttgaacccatacttgcattcctaaaaggaacactgcttggtcat 620
Query: 420 gctatgatttctgtaacatggtgctggattctatttaattatattttatatagtattttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctatgatttctgtaacatggtgctggattctatttaattatattttatatagtattttt 680
Query: 480 aatcttgtacttatgatttgttagcatttattcttcatttctttgctgccatttttatat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatcttgtacttatgatttgttagcatttattcttcatttctttgctgccatttttatat 740
Query: 540 tttggtaagacttcaattcttcctcactatatgtgaccatttgtgcca 587
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttggtaagacttcaattcttcctcactatatgtgaccatttgtgcca 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 988
Length adjustment: 10
Effective length of query: 577
Effective length of database: 978
Effective search space: 564306
Effective search space used: 564306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
