Query= MSMg01no339_p11.b1 MSMg01no339_p11.b1 CHROMAT_FILE:
MSMg01no339_p11.b1 PHD_FILE: MSMg01no339_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:55 2005
(243 letters)
>mm_chr9_71684149_71684791
Length = 643
Score = 437 bits (226), Expect = e-127
Identities = 238/242 (98%)
Strand = Plus / Minus
Query: 1 gcacatagataagagagtgtgtgttaggtgtgtgctgacccaggatttctgcaattaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 442 gcacatagataagagagtgtgtgttaggtgtgtgctgacccaggatttctgcaatcaaat 383
Query: 61 cacacagtgaacatagatgaagtatacaggctgctggcagtgtaacctggagggagacaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 382 cacacagtgaacatagatgaagtatacaggctgctggcagtgtaacctggggggagacag 323
Query: 121 aggacttggctacagaacacttaggaccctggcctgggctcactgccagaccaggggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aggacttggctacagaacacttaggaccctggcctgggctcactgccagaccaggggcag 263
Query: 181 acctgagtcctgggtgacattctgtctagaaaacagttagaaagcagtgggctgtgggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 acctgagtcctgggtgacattctgtctagaaaacagttagaaagcagtgggttgtgggtg 203
Query: 241 tg 242
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no339_p11.g1 MSMg01no339_p11.g1 CHROMAT_FILE:
MSMg01no339_p11.g1 PHD_FILE: MSMg01no339_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:55 2005
(601 letters)
>mm_chr9_71492302_71493307
Length = 1006
Score = 1106 bits (572), Expect = 0.0
Identities = 596/606 (98%), Gaps = 5/606 (0%)
Strand = Plus / Plus
Query: 1 catgtgtgtttctggtttagggtcattccactctcacaaattattcctctttagcaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtgtgtttctggtttagggtcattccactctcacaaattattcctctttagcaattc 260
Query: 61 aggttttcctgtcatc--agaagtcctggtatttctttgtgtgggtttctctcaagtgtt 118
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttttcctgtcatctcagaagtcctggtatttctttgtgtgggtttctctcaagtgtt 320
Query: 119 gagtattaggcttgtaaatactcacccccagctggtaactgctttgggcagttgcagaca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtattaggcttgtaaatactcacccccagctggtaactgctttgggcagttgcagaca 380
Query: 179 gactatcttgggactgggaaatggcaatgaattggaccacagtttgctgatagctctggc 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 gactatcttgggactgggaaatggcaatgaattggaccacagtttgctgataactctggc 440
Query: 239 aatgatacatacacactcaggaagatgggccaggaatgaaactggactatgtggtttggt 298
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 441 aatgatacatacacactcaggaagatgggccaggaatgagactggactctgtggtttggt 500
Query: 299 cagtggtccccgatgtgcagggtggtttggggtctacggcacagtgtggaacctgactgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtggtccccgatgtgcagggtggtttggggtctacggcacagtgtggaacctgactgg 560
Query: 359 acagttggcagtcttggagcctttgtaggggaaccattacttaagggacacaacaccatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagttggcagtcttggagcctttgtaggggaaccattacttaagggacacaacaccatc 620
Query: 419 agctaatttctttggggaataacttatatcctcttcaaagcaatgaagccattaggctaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agctaatttctttggggaataacttatatcctcttcaaagcaatgaagccattaggctaa 680
Query: 479 atcacagatcaattccttcctgcttaactctctacaacat---aagctgccccccactcc 535
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 681 atcacagatcaattccttcctgcgtaactctctacaacatgataagctgccccccactcc 740
Query: 536 aaagaaagggtcttgattacatcaagctagaaagagtaaaagcccaaggcttcctatatc 595
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 741 aaagaaagggtcttgattacatcaagctagaaagagtgaaagcccaaggcttcctatatc 800
Query: 596 cccctg 601
||||||
Sbjct: 801 cccctg 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1006
Length adjustment: 10
Effective length of query: 591
Effective length of database: 996
Effective search space: 588636
Effective search space used: 588636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
