Query= MSMg01no340_h14.b1 MSMg01no340_h14.b1 CHROMAT_FILE:
MSMg01no340_h14.b1 PHD_FILE: MSMg01no340_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:29 2005
(633 letters)
>mm_chr9_95001309_95002340
Length = 1032
Score = 694 bits (359), Expect = 0.0
Identities = 377/383 (98%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 251 actgaatgccacagtagggaattctattctgctctctgtgccacacaaaaacacagagct 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 actgaatgccacagtagggaattctattctgctctctgtgccacacaaaaacacagagct 973
Query: 311 gtgatgacaaagaaggtacggctacctcaggggacattcacgttcccttggactttatag 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 gtgatgacaaagaaggtacggctacctcaggggacattcacgttcccttggactttatag 913
Query: 371 atgaggagagaaagggctatgctcactcagctctaccttccggattgcagtaaggcatat 430
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 912 atgaggagagaaagggctatgctcactcagctctaccttccggatttcagtaagtcatat 853
Query: 431 tttataacagtcagggaaaacacagaaaactgtccagtgggcgcaaggcctctctgtacc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tttataacagtcagggaaaacacagaaaactgtccagtgggcgcaaggcctctctgtacc 793
Query: 491 tctcttggaggattggacaatatgtaaaagtcagacagtagcataagaaaaaaaatgtct 550
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 792 tctcttggaggattggacaatatgtaaaagtcagacagtagcataag-aaaaaaatgtcc 734
Query: 551 agccttgggaattctaagatgaaatgttccaactggagtttaaactaaaacccaagctac 610
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agcctcgggaattctaagatgaaatgttccaactggagtttaaactaaaacccaagctat 674
Query: 611 ggggatcagaatgctcactgaag 633
|||||||||||||||||||||||
Sbjct: 673 ggggatcagaatgctcactgaag 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_h14.g1 MSMg01no340_h14.g1 CHROMAT_FILE:
MSMg01no340_h14.g1 PHD_FILE: MSMg01no340_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:30 2005
(635 letters)
>mm_chr9_94935219_94936253
Length = 1035
Score = 1174 bits (607), Expect = 0.0
Identities = 628/635 (98%)
Strand = Plus / Plus
Query: 1 atttcctaccggtacacttggaagaagacacggagtccgtgatgtagcctctcacaaaac 60
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 atttcctaccggtacacttgaaagaagacatggagtccgtgatgtagcctctcacaaaac 260
Query: 61 tctagatgagttttaaccaggggaatatgaccacattacagattcctatgaaaattcatc 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tctagatgagttttaaccaggggaatatgaccacattacaaattcctatgaaaattcatc 320
Query: 121 cctgaactcatcacagccacaaaactaacaatgccaagtttgcgaggctttgctgactgt 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 cctgaactcatcacagtcacaaaactaacaatgccaagtttgcgaggctttgttgactgt 380
Query: 181 gttcagtatccaacccatcatccactggtacatgttaacattcacagcactgccagcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttcagtatccaacccatcatccactggtacatgttaacattcacagcactgccagcatc 440
Query: 241 gaaggaaggggagaaagatgtggaaacaaagattaaaactcatttttattatcaacattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaggaaggggagaaagatgtggaaacaaagattaaaactcatttttattatcaacattt 500
Query: 301 attgcttctcccttggctgtgtaaaggccagcactccggctaatatccagtggagtgttg 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 attgcttctcccttggctgtgtaaaggccagcactccggctaatatccaggggagtgttg 560
Query: 361 tgttcttcagcttagggtcaatgggagtaccagtgcagagctggaggccatctttccctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttcttcagcttagggtcaatgggagtaccagtgcagagctggaggccatctttccctg 620
Query: 421 tgtcattttgtgaaacaacaattgtctgttatctgaacatttgagactctggcacaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtcattttgtgaaacaacaattgtctgttatctgaacatttgagactctggcacaaaag 680
Query: 481 tatccatatctagaagaaaccagccaagcagacaccacaatgccttacagaatcaactaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatccatatctagaagaaaccagccaagcagacaccacaatgccttacagaatcaactaa 740
Query: 541 ctgttagcacatggtttcagggtctctgttctcttggtgccacacagttctgacgagcat 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 741 ctgttagcacatggtttcagggtctctgttctgttggtgccacacagttctgacgagcat 800
Query: 601 tgtagtggcaggaggctggagcaggggctagtctt 635
|||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtagtggcaggaggctggagcaggggctagtctt 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
