TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCCCTGGCCTCTACTAACTTCCAGCAGGTGACAGTCGTCAGCATTTTCA
GCATCAGACAAGCCATAAAGTTCATTGTTATTTATTACATATTATCACTA
TTTTCTCTGCCTTATGTATGCATGATCTTCATGCTAAGGCAGGGCAAGGC
AGTGCAGAGGAGCCTCCATTGTATATTCTTGCTGAAGCCTTTTCCAGGTT
TAACTGGACTCTGATCTTTTGTGGAGAATCCCATGGAAAACTACCTAACT
CTACTCAAGGAACCAAAGGTCATGTTGACCTAGCTAACTTATCCTAGCTT
TTGGTGAAACTGCACATTTGTGCAGAACCTCCTTTAGCTAACCATTTGTC
TTAGCTGCCTGATTGTGAGGGAACCTCCTCTAGTTACCTAACAGATTATC
TTAGCTTCAATTAAAAATTGTGTGATTCAAACTGTGGGGAGCCCCCTCAG
CAGCTGCTAAGTTAGATGTCTCCATGAGGCCTATATTTAAACAAGAGAGG
GGGGGGAAGGAAGGAAGGAAGGAAGGCTTCCCCCTTTCTTTTTGCCTCTT
TCTTCTTTATTCCCTCCCCCCCCTCTTTTTTCCTTTCCTTCCCCCCCCCC
CCCTTTCCCTTTTTTTTATTTCTATTCCCCTCTTTATTATCCCTTTTTCC
CTTTATTGCTTTTTCACCCATTCCTTTCCCCCCCCN

AAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAGAT
CAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCA
GCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAGATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACACATTCTCAAAGGAACTCACACAAATGTACTCCCTGATAAATG
GAAATTATCCCCAACCTATGATACCCCCGAAAAAGAAAACATTTTTCTAA
ACCCTTGACTCCCTAACAAAGGAAAATGGAGGGGGAAACCAATGCCCCCC

Query= MSMg01no341_a13.b1 MSMg01no341_a13.b1 CHROMAT_FILE:
MSMg01no341_a13.b1 PHD_FILE: MSMg01no341_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:10 2005
         (528 letters)



>mm_chr9_94058257_94059184
          Length = 928

 Score =  913 bits (472), Expect = 0.0
 Identities = 513/530 (96%), Gaps = 6/530 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccctggcctctactaacttccagcaggtgacagtcgtcagcattttcagcatc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gaattctccctggcctctactaacttccagcaggtgacagtcgtcagcattttcagcatc 649

                                                                       
Query: 65  agacaagccataaagttcattgttatttattacatattatcactattttctctgccttat 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 agacatgccataaagttcattgttatttattacatattatcactattttctctgccttat 589

                                                                       
Query: 125 gtatgcatgatcttcatgctaaggcagggcaaggcagtgcagaggagcctccattgtata 184
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 588 atatgcatgatcttcatgctaagtcagggcaaggcagtgcagaggagcctccattgtata 529

                                                                       
Query: 185 ttcttgctgaagccttttccaggtttaactggactctgatcttttgtggagaatcccatg 244
           ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 528 ttcttgctgaagcctttcccaggtttaactggactctgatcttttgccgagaatcccatg 469

                                                                       
Query: 245 gaaaactacctaactctactcaaggaaccaaaggtcatgttgacctagctaacttatcct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 468 gaaaactacctaactctactcaaggaaccaaaggtcatgttgacctagctaacttgtcct 409

                                                                       
Query: 305 agcttttggtgaaactgcacatttgtgcagaacctcctttagctaaccatttgtcttagc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agcttttggtgaaactgcacatttgtgcagaacctcctttagctaaccatttgtcttagc 349

                                                                       
Query: 365 tgcctgattgtgagggaacctcctctagttacctaacagattatcttagcttcaattaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgcctgattgtgagggaacctcctctagttacctaacagattatcttagcttcaattaaa 289

                                                                       
Query: 425 aattgtgtgattcaaactgtggggagccccctcagcagctgctaagttagatgtctccat 484
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 288 aattgtgtgattcaaactgtggggagccccctcagcagctgccaagttagatgtctccat 229

                                                             
Query: 485 gaggcctatatttaaacaagagag------gggggggaaggaaggaagga 528
           ||||||| ||||||||||||||||      ||||||| |||||| |||||
Sbjct: 228 gaggcctctatttaaacaagagagaaggggggggggggaggaagaaagga 179


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space:   475524
Effective search space used:   475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)