Query= MSMg01no341_c22.b1 MSMg01no341_c22.b1 CHROMAT_FILE:
MSMg01no341_c22.b1 PHD_FILE: MSMg01no341_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:22 2005
(428 letters)
>mm_chr9_122985627_122986454
Length = 828
Score = 804 bits (416), Expect = 0.0
Identities = 422/424 (99%)
Strand = Plus / Plus
Query: 5 gaattctgcctgcagaaaggccatccatagcctttaagaacaaaactaaactccctcagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcctgcagaaaggccatccatagcctttaagaacaaaactaaactccctcagc 264
Query: 65 ctgcagcctgacaccacctgcccttctgcacaggccgtggggagagagcagagcagaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgcagcctgacaccacctgcccttctgcacaggccgtggggagagagcagagcagaagc 324
Query: 125 aggtttggaaaaggtttattgcattgtttccatgtggaagcactgacagagttgggaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggtttggaaaaggtttattgcattgtttccatgtggaagcactgacagagttgggaaga 384
Query: 185 ggcagaacgtcccaccgacttctgaaaaaccacagggctacattaactttcttcctaccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggcagaacgtcccaccgacttctgaaaaaccacagggctacattaactttcttcctaccc 444
Query: 245 acaactagaatgaaaaaccttatccccacccccaccccaagcaaaagctaaaaagggagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acaactagaatgaaaaaccttatccccacccccaccccaagcaaaagctaaaaagggagt 504
Query: 305 tttgtggtgattgctttaaaacccactggtttgggggacttcatggtgctcaggttccac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttgtggtgattgctttaaaacccactggtttgggggacttcatggtgctcaggttccac 564
Query: 365 gtggctgtagggttcaagagcagtcttctcttaacacctcctacatcccctggttcttcc 424
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 565 gtggctgtagggttcaagagcagtcttctcttagcacctcctacatcccctggttcctcc 624
Query: 425 ctag 428
||||
Sbjct: 625 ctag 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_c22.g1 MSMg01no341_c22.g1 CHROMAT_FILE:
MSMg01no341_c22.g1 PHD_FILE: MSMg01no341_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:22 2005
(341 letters)
>mm_chr9_123181414_123182158
Length = 745
Score = 605 bits (313), Expect = e-177
Identities = 336/345 (97%), Gaps = 4/345 (1%)
Strand = Plus / Minus
Query: 1 tgtgccctttgggtctaagaaggttatctcagtggagatgggagcttctcaaaggacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgtgccctttgggtctaagaaggttatctcagtggagatgggagcttctcaaaggacaca 486
Query: 61 ctgtagcagcaaagtccagaactcacaccctggtatggaacaaagtaa-catctacttac 119
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 485 ctgtagcagcaaagtccagaactcacaccctggtatggaacaaagtaaccatctgcttac 426
Query: 120 tttgatggctctggacacaaaggccctgagtgtcttgggaagtgggatatggctgagaac 179
||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 425 tttgatggctctggacacaaagggcctgaatgccttgggaagtgggatatggctgagaac 366
Query: 180 aggattgactgaaaggcttagagattctgtgaccaaatgaa---ggggaggatgagaata 236
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 365 aggattgactgaaaggcttagagattctgtgaccaaatgaaggggggggggatgagaata 306
Query: 237 aagaaagtgaggttggaaagcaggcatgaaaagaggtactgaggcccacggcaggcattg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aagaaagtgaggttggaaagcaggcatgaaaagaggtactgaggcccacggcaggcattg 246
Query: 297 gagggcacatgggcaaacatggggcagattgaggatttttgatag 341
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gagggcacatgggcaaacatggggcagattgaggatttttgatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 745
Length adjustment: 9
Effective length of query: 332
Effective length of database: 736
Effective search space: 244352
Effective search space used: 244352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|