XXXXXXXXXXXXXXXXXXXXXXTTCCGAGAGGATCCGCGGAATTCAGGGT
TTCCGTTCTCAGGTGGACAAGGAGTCAGCAGGATGACAAACAGACCTGGA
CACCAGAGAGAGCATTGTATCTGAATGTAATGTCTCCAGGTGAGCAACAG
ACTCATAATACAGAAGAAAAACAAGGAAATTAGTCAATACATAGCCAAGG
TATATCAAGATGTATAATGGCTCTTTACACAAAACAGAGGAAAATGCATA
CATAAAAGTTTACAGGAACCAGGCAGTGTTTACAACTGAGTTAAGATCAG
CCCTATCTAATGTCAGCTATTCACAGGAGCCAGGTTAAAGGGCTAATATG
CCCAGGTGCAATTCTGGTCTATTGTATAACCCACCACCAGGGGGTTTCTG
CTCTTGCTAACCTTTTCATAAATAATACAATGCTCTAGTTCCTCCTTAAA
CCACAACCTTCCTTCTACCTAGACCATTGTAAATTCCTGCATATGGGAGT
ACCTCAGCTATATTTCTAAGTTTACTTTGTTGAAGTAGCCCTGATATTTT
TAGCTCTTATCTAGTAAAGTACTGCGCCAAAGCTTGCAAGACCCCCCTTA
ATATCCCAGGGACAAATCTGGGTAAGGGTCCCAAAGAAACTCTTAGAAAC
AAGGTTCCCCGGAAAATTTTTTCCCCCAGAAAGGGGGCCAAGGGTTTGGA
TAACACACCCACCCTCCTCATCTTCTTATTTTTTTGTCTTTTTTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTCTTCCTTAAGGAAGTGTCAGCTTGGAGGA
CAGGGGTGGAAACATTTCCTTTGCCTCCTCTGCAGAGTTCAGTACATGAA
GGCACTGAGTAATTACCCCTAACATCCTGAGCATGGTGCGGTTGGCTATG
AGAAAAACCAACAAATGGTGTATGTGACTGCATTCTACGCTCATCCTGGA
AAGTTTGAGCCAGATATATCTTCCTAGCAGGAGTAGGATGAAAACCTACT
GCTGATAGAAATGTGCAGAAACGTGCAATGCAGGCTTCCCAATCGATAAA
ACATAGGCATTTCGGAAGAAGTAAAAAAAAAAAAAAAAAAAAAACAGAGT
TGGTTTTATTTTTCTGGGCTATGTGGGAGTTTGGATCTCAGTGGGGGAGA
TATAGTCATGGGATCTTCCCTGCTGGGGGCTCTGGATCATCTGTAAAGAC
TTCCTTTAGGGAAGGAGGAATTCTAGCTCTCATTTCTAGGGGCTTAAAAG
AGTGAACTGGGGGCAGCCCTTATGCACGGAAAGAAAGAGGGGGCCACAAA
GTGTTTGTACCAGCCAGAATGATTCTAAAAGGTTCTAATCGCCCTTGGTT
TATGGCCCTCATTGAAAAGAAACCCTCCCCCCCAATTTGCCGGGCCTTTG
TGAGTCCACAAAAGTGGTTTATTTTGTTTACTTCCCACTCCCCCCTN

Query= MSMg01no342_b18.g1 MSMg01no342_b18.g1 CHROMAT_FILE:
MSMg01no342_b18.g1 PHD_FILE: MSMg01no342_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:32 2005
         (438 letters)



>mm_chr9_97504437_97505273
          Length = 837

 Score =  808 bits (418), Expect = 0.0
 Identities = 431/438 (98%), Gaps = 6/438 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcttccttaaggaagtgtcagcttggaggacaggggtggaaacatttcctttgcctcct 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 502 ttcttccttaaggaagtgtcagcttggaggaca-gggtggaaacatttcctttgcctcct 444

                                                                       
Query: 61  ctgcagagttcagtacatgaaggcactgagtaattacccctaacatcctgagcatggtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctgcagagttcagtacatgaaggcactgagtaattacccctaacatcctgagcatggtgc 384

                                                                       
Query: 121 ggttggctatgagaaaaaccaacaaatggtgtatgtgactgcattctacgctcatcctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggttggctatgagaaaaaccaacaaatggtgtatgtgactgcattctacgctcatcctgg 324

                                                                       
Query: 181 aaagtttgagccagatatatcttcctagcaggagtaggatgaaaacctactgctgataga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaagtttgagccagatatatcttcctagcaggagtaggatgaaaacctactgctgataga 264

                                                                       
Query: 241 aatgtgcagaaacgtgcaatgcaggcttcccaatcgataaaacataggcatttcggaaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatgtgcagaaacgtgcaatgcaggcttcccaatcgataaaacataggcatttcggaaga 204

                                                                       
Query: 301 agtaaaaaaaaaaaaaaaaaaaaaacagagttggttttatttttctgggctatgtgggag 360
           |||     ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 203 agt-----aaaaaaaaaaaaaaacacagagttggttttatttttctgggctatgtgggag 149

                                                                       
Query: 361 tttggatctcagtgggggagatatagtcatgggatcttccctgctgggggctctggatca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tttggatctcagtgggggagatatagtcatgggatcttccctgctgggggctctggatca 89

                             
Query: 421 tctgtaaagacttccttt 438
           ||||||||||||||||||
Sbjct: 88  tctgtaaagacttccttt 71


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 837
Length adjustment: 9
Effective length of query: 429
Effective length of database: 828
Effective search space:   355212
Effective search space used:   355212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)