MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-343H12
Chromosome	9 (Build37)
Map Location	112,967,468 - 112,967,849
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Arpp21, LOC100039341, LOC620760, LOC100043800, EG622110, LOC100039391
Downstream gene	LOC100043801, LOC100043802, LOC636680, Pdcd6ip, Clasp2, Ubp1, Fbxl2, Susd5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Arpp21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74100 MGI:107562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039341 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC620760 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043800 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG622110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622110 MGI:3642990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100039391 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100043801 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043801
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	LOC100043802 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC636680 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:636680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 24 Proteins pseudo : _no_value

name	Pdcd6ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18571 MGI:1333753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clasp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76499 MGI:1923749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ubp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22221 MGI:104889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Fbxl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72179 MGI:1919429
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Susd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382111 MGI:2685972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs

name	Arpp21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15149483 GeneID:74100 MGI:107562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclic AMP-regulated phosphoprotein, 21 transcript_id : NM_033264.1

name	Arpp21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753996 GeneID:74100 MGI:107562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclic AMP-regulated phosphoprotein, 21 transcript_id : NM_028755.2

name	LOC100039341 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260331 GeneID:100039341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039341 transcript_id : XM_001472717.1

name	LOC620760 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260387 GeneID:620760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC620760 transcript_id : XM_001481077.1

name	LOC100043800 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260389 GeneID:100043800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043800 transcript_id : XM_001481078.1

name	EG622110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260333 GeneID:622110 MGI:3642990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG622110 transcript_id : XM_922665.3

name	LOC100039391 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260335 GeneID:100039391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001472809.1

name	LOC100043801 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260391 GeneID:100043801
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100043801 transcript_id : XM_001481079.1

name	LOC100043802 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260393 GeneID:100043802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043802 transcript_id : XM_001481080.1

name	Pdcd6ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755001 GeneID:18571 MGI:1333753
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death 6 interacting protein transcript_id : NM_011052.1

name	Clasp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126506305 GeneID:76499 MGI:1923749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CLIP associating protein 2 transcript_id : NM_001081960.1

name	Clasp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126506303 GeneID:76499 MGI:1923749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CLIP associating protein 2 transcript_id : NM_029633.2

name	Ubp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032031 GeneID:22221 MGI:104889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : upstream binding protein 1 transcript_id : NM_001083319.1

name	Ubp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031988 GeneID:22221 MGI:104889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : upstream binding protein 1 transcript_id : NM_013699.2

name	Fbxl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363633 GeneID:72179 MGI:1919429
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and leucine-rich repeat protein 2 transcript_id : NM_178624.4

name	Susd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386581 GeneID:382111 MGI:2685972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs product : sushi domain containing 5 transcript_id : XM_356198.5

name	Arpp21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15149484 CCDS:CCDS23587.1 GeneID:74100 MGI:107562
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008599 - protein phosphatase type 1 regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; thymocyte ARPP; protein phosphatase 1, regulatory (inhibitory) subunit 1C product : cyclic AMP-regulated phosphoprotein, 21 isoform 2 protein_id : NP_150289.1

name	Arpp21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311869 GeneID:74100 MGI:107562
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008599 - protein phosphatase type 1 regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; thymocyte ARPP; protein phosphatase 1, regulatory (inhibitory) subunit 1C product : cyclic AMP-regulated phosphoprotein, 21 isoform 1 protein_id : NP_083031.1

name	LOC100039341 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260332 GeneID:100039341
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472767.1

name	LOC620760 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260388 GeneID:620760
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481127.1

name	LOC100043800 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260390 GeneID:100043800
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481128.1

name	EG622110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260334 GeneID:622110 MGI:3642990
definition	codon_start : 1 product : hypothetical protein protein_id : XP_927758.3

name	LOC100039391 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260336 GeneID:100039391
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472859.1

name	LOC100043801 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260392 GeneID:100043801
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481129.1

name	LOC100043802 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260394 GeneID:100043802
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481130.1

name	Pdcd6ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755002 CCDS:CCDS23588.1 GeneID:18571 MGI:1333753
definition	GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : programmed cell death 6 interacting protein protein_id : NP_035182.1

name	Clasp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126506306 GeneID:76499 MGI:1923749
definition	GO_component : GO:0005881 - cytoplasmic microtubule [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0007026 - negative regulation of microtubule depolymerization [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2; CLASP2alpha; CLASP2gamma product : CLIP-associating protein CLASP2 isoform b protein_id : NP_001075429.1

name	Clasp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126506304 GeneID:76499 MGI:1923749
definition	GO_component : GO:0005881 - cytoplasmic microtubule [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0007026 - negative regulation of microtubule depolymerization [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1; CLASP2alpha; CLASP2gamma product : CLIP-associating protein CLASP2 isoform a protein_id : NP_083909.2

name	Ubp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134032032 GeneID:22221 MGI:104889
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : upstream binding protein 1 isoform a protein_id : NP_001076788.1

name	Ubp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305605 GeneID:22221 MGI:104889
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : upstream binding protein 1 isoform b protein_id : NP_038727.1

name	Fbxl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519963 GeneID:72179 MGI:1919429
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box and leucine-rich repeat protein 2 protein_id : NP_848739.1

name	Susd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63595304 GeneID:382111 MGI:2685972
definition	codon_start : 1 product : similar to KIAA0527 protein protein_id : XP_356198.3

name	LOC636680 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260395 GeneID:636680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 24 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_034977.1

clone name	MSMg01-442H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066C02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-343H12.T7 (MSMg01no343_h12.b1)	MSMg01-343H12.TJ (MSMg01no343_h12.g1)
ACC	AG456771	AG456772
length	808	811
length of high quality (start - end)	386 (37 - 422)	239 (69 - 307)
definition	CHROMAT_FILE: MSMg01no343_h12.b1 PHD_FILE: MSMg01no343_h12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:33:19 2005	CHROMAT_FILE: MSMg01no343_h12.g1 PHD_FILE: MSMg01no343_h12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:33:19 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTCA TCTGTCTACATGGGTTCTTCTAGACTCTTGGCCTGAGAGTGCCTTTTGCT CAGATCCCTTCTTCTGCTTCAGGACATGCATCTTCTTCCAGTCGGTAGCC AGCTGGGCAACACGGAAGTGTCTTCCTCCATGGCCTGGGGTCCATCCACT TAAAATACGGTCATTAAGGGAGATGGAATTTACATCTGTGGGAAAGAAGA GACCTAACCTCCTCCACTGATGCGTAACAGTCACAGCTGGCCCACCACCC CATCTCCTCCCCTTCCTGTCTCCTACATCTTCCCCATGGGCTCAAGCAGG GGCATTAAGTTCCCTGCCTTCTGTTTTTGTAGAATTTAAAGTAGCCTCTC TTCCCTGGTGAAGCTGTCTTAACTATATCTCCGTGCCTTTTTAGCTCCGT TTAGGCGCAAGTTTCTTTTTGCACACAGAACTTTTTTTTGGAGGTCTTGA TGACTCACTTGGATATTAGTTTGTTCTCTTAAAAATTGTCTCTCTAACCT CCTTCTATCATAAATCTCGCCCTATGCTATTTTTTATTATACCGTCTTCT TTATTTTTCCAGTACGCCAGTTTTACGAATAAACATAGATGATTTATATA GGTCTTCACATCTACTCGTCATCTATCATTTATATTTCAGGTGTAGTACC GTCCTATATTATACTCGTTCCCTCACTCTTATCTTGGTTAGCGCTTTTTT ACTCTACCGTTCCACCTTTCTCTTTTCCTCTCGTATACATTTTTTCACTC TATTTGTC	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXTTCTCCAGAGCATCTGGAAGGACACTGTTCTG GTTGGTTTTATGTTAACTTGACACAAGCTAGAGATACTTGGAAGGAGGGA GCTTCAACTGAGAAAATGTCTCCATAAGATGCAAGTCTGTGGGGCATTTT CTTAATTAGTGATTGATAGGAGAGAGCTCAGCCCATTGTAGGTAAGACCA CCCCTGGGTTGGTGGTTCTAGCTTCAATAAGGAAATGGGCTGAGCCAGCC ATGTGGGACAAGTCTTTAACTAGCGCCTGTTCATGGCCCTTGCATCAGCT CCTGTCTTCTGCTTCCTGCCTCCTGTTTTCTGCCCCGCTTGATTTTATGC CTAACTCCCTCCCCCTTCTTATTTTATTGTTTTACAATCATTGTGTATAA TCTCCTTTTCTTCTCCTAGTTGTTCTTAGTGCTCCTCGTGTCCTTGGTTT CGTTATTTATTTATTATTTTTTGTTCCGTCTCTTTGCCCTTTATCCGGAA TTTTCTCTTCCCCCATTTATTTTTTTCTTCTCTTCTTGCCGATTTTGTTT TGATTTTTCCTCTCTACTTTTTCTTTGATGCCCTTTTTCCTATCGTCTAT ATTCTTTTGTTTTAGGTCGTTTCTCTGCTCCTCTCCTCTCTAATATTCTT CTTATTTCCTGTTTTCCTTTTTTAATTGTCCCGCACCCTCATTCTTCTAT CCGTGTCATCCTTCTGTCATTCCTATATTAATTCTCTCCTTCTTTCTTCT CTCCTTTTCCN
quality values	Open. Hide. 16 21 21 14 12 12 12 27 19 23 25 28 28 30 48 44 30 24 24 24 22 21 27 12 9 7 7 8 8 8 22 19 21 14 12 11 24 30 59 59 36 35 28 33 36 42 47 53 53 53 34 34 20 30 28 29 23 29 28 40 37 48 57 59 57 57 59 59 68 68 68 68 68 68 68 68 68 68 57 68 57 57 43 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 57 59 59 59 57 59 57 68 68 51 50 50 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 59 59 57 59 59 52 59 52 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 59 59 59 59 52 57 57 57 59 59 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 57 59 68 68 68 57 57 43 43 35 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 48 48 59 59 68 68 68 68 68 57 57 57 59 68 68 68 68 68 68 57 68 68 68 68 68 68 59 59 59 59 59 57 57 57 57 57 57 59 59 59 48 48 48 59 57 57 57 57 43 43 43 59 57 43 43 35 35 35 59 34 59 32 32 23 26 26 28 28 35 47 43 47 47 40 34 34 25 25 25 34 34 59 59 59 39 39 36 35 23 16 9 9 9 23 12 13 13 28 24 35 34 31 15 9 9 13 13 20 16 28 20 20 22 23 23 24 22 17 12 8 8 8 8 19 19 28 17 18 10 11 11 11 11 15 21 12 14 12 12 10 13 8 8 8 8 10 8 8 8 15 19 19 16 9 8 8 8 8 8 8 8 8 8 8 9 8 8 10 13 10 10 6 6 8 8 8 8 8 8 8 8 10 19 21 10 9 9 8 8 6 6 8 6 6 6 6 8 6 6 8 8 8 10 10 8 8 8 8 8 8 8 8 8 10 10 8 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 9 9 12 12 12 11 11 11 15 11 10 10 8 8 8 8 8 10 10 8 9 9 10 10 10 11 13 10 10 10 16 11 8 8 6 6 8 8 8 10 8 8 8 8 8 8 8 8 9 8 10 6 9 8 10 17 11 8 6 6 6 6 8 8 6 6 6 6 10 9 10 12 12 11 11 12 11 11 11 10 8 8 6 6 10 8 12 8 8 8 8 8 8 8 8 10 8 8 10 8 8 8 8 8 8 10 8 11 11 10 8 8 8 8 7 9 9 11 8 8 8 8 8 8 9 8 8 6 6 10 10 11 10 10 10 11 12 8 8 8 8 8 10 10 10 10 9 8 8 8 8 8 8 8 8 12 8 8 10 8 8 8 8 8 8 9 9 8 8 8 8 8 10 8 10 8 12 12 10 8 8 8 8 8 8 6 7 8 8 8 6 6 8 6 6 10 10 12 14 6 6 8 8 8 9 8 8 6 6 8 8 8 6 6 8 8 10 12 22 24 22 17 17 17 16 12 8 8 8 10 13 10 10 10 8 8 6 6 8 8 11 11 12 12 10 10 10 10 9 8 8 10 8 11 8 11 11 11	Open. Hide. 11 11 3 3 3 11 11 21 22 36 31 37 37 37 37 37 39 39 39 44 41 41 44 59 35 32 24 34 34 30 23 21 21 21 28 28 40 44 39 39 34 37 37 37 37 37 39 59 50 53 53 57 57 33 36 36 33 33 37 44 57 57 42 42 40 40 40 47 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 57 57 57 57 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 51 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 50 50 50 50 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 54 41 28 15 11 11 34 34 41 28 20 20 32 32 42 42 25 28 28 28 28 37 40 46 44 32 28 20 15 25 15 22 12 16 16 33 29 32 32 32 24 25 12 11 11 15 15 16 24 21 20 15 15 10 13 12 12 11 11 18 21 12 12 11 12 12 17 22 24 21 15 11 11 10 8 8 8 8 8 10 11 11 11 11 13 15 13 18 18 12 16 15 13 9 9 15 10 10 16 21 24 22 22 29 29 30 30 25 13 13 12 12 11 11 10 11 11 16 22 17 21 22 14 14 16 13 10 9 9 9 9 11 12 23 23 8 8 8 8 8 8 8 9 14 9 9 9 19 15 13 11 16 16 15 10 10 9 9 9 9 8 8 11 8 9 8 8 10 10 10 8 8 8 8 8 8 6 6 8 8 10 16 20 16 16 15 13 14 12 11 8 8 8 8 8 8 10 10 8 6 6 8 8 8 8 8 8 6 9 8 8 8 9 9 9 10 10 10 6 8 6 6 8 8 11 8 8 6 6 6 8 10 13 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 10 8 9 11 10 8 8 8 8 8 10 10 8 10 6 9 10 10 12 8 8 8 8 10 8 8 8 8 8 10 10 10 10 8 8 8 8 8 9 8 8 6 6 8 12 11 8 8 6 6 8 8 11 10 10 11 10 10 10 9 9 10 14 17 22 21 18 11 10 8 10 8 8 8 8 8 11 11 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 10 8 8 8 8 8 8 10 10 10 8 6 6 8 8 9 10 11 10 8 13 8 8 8 8 8 10 13 10 9 9 8 12 11 11 11 9 9 9 11 11 11 11 12 12 12 12 12 16 16 18 13 13 10 11 11 17 10 8 8 8 8 9 10 10 10 11 12 10 8 8 6 6 8 8 8 9 14 15 16 11 10 10 11 10 8 6 6 6 6 6 6 10 8 8 8 8 8 8 8 10 10 6 6 6 6 7 7 8 10 13 9 8 8 15 18 12 13 11 11 9 8 8 8 8 10 10 9 8 10 10 11 12 11 8 8 8 8 8 9 10 12 10 8 8 8 10 8 8 6 6 6 8 8 10 12 10 10 10 12 9 11 11 10 10 10 13 15 10 11 9 8 8 8 11 8 9 11 11 10 10 10 13 15 11 8 8 8 10 9 10 10 13 11 10 8 8 8 8 12 12 13 7 10 9 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no343_h12.b1 MSMg01no343_h12.b1 CHROMAT_FILE:
MSMg01no343_h12.b1 PHD_FILE: MSMg01no343_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:19 2005
         (386 letters)



>mm_chr9_112967264_112968049
          Length = 786

 Score =  716 bits (370), Expect = 0.0
 Identities = 379/382 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctcatctgtctacatgggttcttctagactcttggcctgagagtgccttttgct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcatctgtctacatgggttcttctagactcttggcctgagagtgccttttgct 264

                                                                       
Query: 65  cagatcccttcttctgcttcaggacatgcatcttcttccagtcggtagccagctgggcaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagatcccttcttctgcttcaggacatgcatcttcttccagtcggtagccagctgggcaa 324

                                                                       
Query: 125 cacggaagtgtcttcctccatggcctggggtccatccacttaaaatacggtcattaaggg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacggaagtgtcttcctccatggcctggggtccatccacttaaaatacggtcattaaggg 384

                                                                       
Query: 185 agatggaatttacatctgtgggaaagaagagacctaacctcctccactgatgcgtaacag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 agatggaatttacatctgtgggaaagaagagacctaacctcctccactggtgcgtaacag 444

                                                                       
Query: 245 tcacagctggcccaccaccccatctcctccccttcctgtctcctacatcttccccatggg 304
           |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 445 tcacagctggcccaccaccccatctcttccccttcctgtctcctacatcttccccatgcg 504

                                                                       
Query: 305 ctcaagcaggggcattaagttccctgccttctgtttttgtagaatttaaagtagcctctc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctcaagcaggggcattaagttccctgccttctgtttttgtagaatttaaagtagcctctc 564

                                 
Query: 365 ttccctggtgaagctgtcttaa 386
           ||||||||||||||||||||||
Sbjct: 565 ttccctggtgaagctgtcttaa 586


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space:   292929
Effective search space used:   292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information