Query= MSMg01no343_j13.b1 MSMg01no343_j13.b1 CHROMAT_FILE:
MSMg01no343_j13.b1 PHD_FILE: MSMg01no343_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:29 2005
(453 letters)
>mm_chr9_28149172_28150024
Length = 853
Score = 822 bits (425), Expect = 0.0
Identities = 443/449 (98%), Gaps = 2/449 (0%)
Strand = Plus / Minus
Query: 6 ggaattctcttaaatcttctc-tgatatgtttgatcttcatatgacttacttaaaaataa 64
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ggaattctcttaaatctt-tcatgatatgtttgatcttcatatgacttacttaaaaataa 595
Query: 65 attcttcaattctgtcattaatttaagtctccaactaaagcaattattttatgacaattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 attcttcaattctgtcattaatttaagtctccaactaaagcaattattttatgacaattt 535
Query: 125 aaagttattcttgggctgccaaaatcagcacaagaaacaagagacagaagaatctgtagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aaagttattcttgggctgccaaaatcagcacaagaaacaagagacagaagaatctgtagt 475
Query: 185 gtgaaagaatttagggacccaaatgatcaaggttaggtgactcctggaagttgaaaggac 244
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gtgaaagaatttagggacccacatgatcaaggttaggtgactcctggaagttgaaaggac 415
Query: 245 atgacacacttgagagagattataaagttggcacaaaggaaaaccgagggcagatgagtc 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 414 atgacacacttgagagagattataaagctggcacaaaggaaaaccgagggcagatgagtc 355
Query: 305 cccatgtgagctatctaaacttaagagcaatgggtagtagtaaggagtcagaatggtcac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cccatgtgagctatctaaacttaagagcaatgggtagtagtaaggagtcagaatggtcac 295
Query: 365 aaaaatatggtcaaagaaacagaattcccagcactgcttgctagagtagatggctagtga 424
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aaaaatatagtcaaagaaacagaattcccagcactgcttgctagagtagatggctagtga 235
Query: 425 tgatgcccccacttcttatatactggctg 453
|||||||||||||||||||||| ||||||
Sbjct: 234 tgatgcccccacttcttatatattggctg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_j13.g1 MSMg01no343_j13.g1 CHROMAT_FILE:
MSMg01no343_j13.g1 PHD_FILE: MSMg01no343_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:29 2005
(388 letters)
>mm_chr9_28033550_28034337
Length = 788
Score = 735 bits (380), Expect = 0.0
Identities = 386/388 (99%)
Strand = Plus / Plus
Query: 1 tctttaagtaactaaatatttggatgcttgggtgatcagactccaaactctatgaggttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttaagtaactaaatatttggatgcttgggtgatcagactccaaactctatgaggttc 260
Query: 61 gcagctcttctccctaatctccatctcatggagggaagcagggtcaagtggtggtagttc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gcagctcttctccctaatctccatctcatggagggaaggagggtcaagtggtggtagttc 320
Query: 121 ttctgcattctgggtaacgcctgcactcagtcaatctgccacagaggagcttcgtgaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgcattctgggtaacgcctgcactcagtcaatctgccacagaggagcttcgtgaaca 380
Query: 181 gattgttaatttccccctttctccctgaatagcactgtgccttctggcaggaagcggcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattgttaatttccccctttctccctgaatagcactgtgccttctggcaggaagcggcat 440
Query: 241 gttccatccatccacactctctcacctgtggacaggagaagctctctaatcagctcccgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 gttccatccatccacactctctcacctgtggacaggagaagctctctaatcagcgcccgc 500
Query: 301 tttttgccccactgggctgtgactgagcagggagaccaagctctgtgcaacttgctaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttttgccccactgggctgtgactgagcagggagaccaagctctgtgcaacttgctaatt 560
Query: 361 gtctcagcctgtaactcttaaatgatga 388
||||||||||||||||||||||||||||
Sbjct: 561 gtctcagcctgtaactcttaaatgatga 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
