XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAG
GATATCCCAAGCTAAGACAGAGAAACCGTGTCAAACAAACAAGCAAACAA
ACAAACAAAATAACAAGAACAACAAGCAAACAGAAATACTCTAGCAAAAA
TAACCAATGGGGTGATTCCACATGAATAAAACTAGAGATGGGCAGTGTTT
GGGTCAGAGTTCTTTCTCTAAAGGAGCAGAGCCAATGGAGTGGATATATA
GACACATGGGATGTATTAGTCTGACTGACAGACCGTGGCCTGGGTAGCCC
AACAAGGTCTGTTTTTATGTGAGGGCTGTCCAGATGTGAGGGCTGTCCAG
ATGTGAGGGCTGTCCAGATGTGGCTGATCTCCACAATTCTCCCTCACACA
CAGTAGCAGAGCCCACCAACAAAGAAAAGCCCAGAACTAAACAGGCTCAC
AGCTGAACTCTACCATACTTTTCAGAAATTGGCAATCTCGACCACCTGTA
TGGAGCACAAGCTCATTTAGTATTACACTAACGCCCTAACTAGATAAGGA
CTCTACCATTAAGAACTACTTGCCGCCTTGTTCCCTTGATTAAAAAAGTA
CACTTTTTTTCCACCCCTATTTTTATCTCTATACGAACCTTCCCTTTTTT
TTTGTTTATGACCTTCGGTTCGGTTCCCCTTCACCTTAATCCCCTGGTCG
TTATTATCACGTTTTGCTCCTTCTTTTTTCTTTTATCTTCCATTATT

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAAGACCATTTTCACCTTCGATAGAGAGGT
CAAGGCTAGTCTAGGCTACTGTGGCCCTGCCTCAAAACCTAAATTCCCAT
TAACAGAGAGAAAAGGAGAGAGAGAGAGACAGAGACAGAGACAGAGACAG
AGAGAGAGGCATAGACCAAAACCCAAAGAGCAGACTGCAGTTATGTAAGG
TACACCGTGTGCAAGACTGCCAGGCTCAGCCACACAGCCTCTCTAGAGGT
GGCCATACCAGAGCACCACTCAGAGTCCACATCCGATCAAGACTGACAAT
CACAATGCTCCAAGAGCACACGCCAGGAAATCATCACACAGTGCTGGACA
TCTGAAAGATTCCTAAACCGAACCTCAGTAAACCAACACAAAAAATACAA
TAAAATGATGGAATATCCCATTTTCAAAAATGAAACAGTTTTCCTACTTC
CAACTCTATCTGAAAGTTTCGTTTTGGTTTGTTTCCTTTTTCATGGTAAA
AGAGAATTTAACTTTCTGGGGCCAAGAAAACAGAATCTTTAATATACCTA
CCGTGGGACATAAAAAGGTGTTTTTTTTTGGAAAAAAAATTTCCTTTTTT
TGTAACCCCCTCAGCCCCCTTTTTTTCTCCTTTATTTGCTGTGGGGCCCG
CTTACTCCTTCTCCTCTCCTTCATCCCTGTTACACTTCTTTTCCTTTTTT
TTT

Query= MSMg01no343_m12.g1 MSMg01no343_m12.g1 CHROMAT_FILE:
MSMg01no343_m12.g1 PHD_FILE: MSMg01no343_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:44 2005
         (440 letters)



>mm_chr9_118242963_118243802
          Length = 840

 Score =  739 bits (382), Expect = 0.0
 Identities = 430/456 (94%), Gaps = 16/456 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagaccattttcaccttcgatagagaggtcaaggctagtctaggctactgtggccctgcc 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aagatcattttcaccttcgatagagaggtcaaggctagtctaggctactgtggccctgcc 244

                                                                       
Query: 61  tcaaaacctaaattcccattaacagagagaaaaggagagagag----------------a 104
           |||||||||||||||||||||||||||||| ||||||||||||                |
Sbjct: 245 tcaaaacctaaattcccattaacagagagagaaggagagagagagacagagacagagaca 304

                                                                       
Query: 105 gagacagagacagagacagagacagagagagaggcatagaccaaaacccaaagagcagac 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 305 gagacagagacagagacagagacagagagagaggcatagaccaaaacccaaggagcagac 364

                                                                       
Query: 165 tgcagttatgtaaggtacaccgtgtgcaagactgccaggctcagccacacagcctctcta 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgcagttatgtaaggtacaccgtgtgcaagactgccaggctcagccacacagcctctcta 424

                                                                       
Query: 225 gaggtggccataccagagcaccactcagagtccacatccgatcaagactgacaatcacaa 284
           |||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 425 gaggcggccataccatagcaccactcagagtccacatccgatcaagactgacagtcacaa 484

                                                                       
Query: 285 tgctccaagagcacacgccaggaaatcatcacacagtgctggacatctgaaagattccta 344
           ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 485 tgctccaagagcacacgccaggatatcatcacgcagtgctggacatctgaaagattccta 544

                                                                       
Query: 345 aaccgaacctcagtaaaccaacacaaaaaatacaataaaatgatggaatatcccattttc 404
           ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 545 aactgaacctcagtaaaccaacacaaaaaatacaataaaattatggaatatcccattttc 604

                                               
Query: 405 aaaaatgaaacagttttcctacttccaactctatct 440
           ||||||||||||||||||||||||||||||||||||
Sbjct: 605 aaaaatgaaacagttttcctacttccaactctatct 640


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space:   358161
Effective search space used:   358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)