Query= MSMg01no343_p06.b1 MSMg01no343_p06.b1 CHROMAT_FILE:
MSMg01no343_p06.b1 PHD_FILE: MSMg01no343_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:59 2005
(144 letters)
>mm_chr9_76735259_76735802
Length = 544
Score = 279 bits (144), Expect = 7e-80
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 gccacccttcccctttagatttagtcatctcttttcacgagtctttaattttttttttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccacccttcccctttagatttagtcatctcttttcacgagtctttaattttttttttag 260
Query: 61 ttctttgtgtagtgttgaggagcattcagcaccttgtttattccaagtttttgtttgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctttgtgtagtgttgaggagcattcagcaccttgtttattccaagtttttgtttgttt 320
Query: 121 gttggttggttggttgattattaa 144
||||||||||||||||||||||||
Sbjct: 321 gttggttggttggttgattattaa 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no343_p06.g1 MSMg01no343_p06.g1 CHROMAT_FILE:
MSMg01no343_p06.g1 PHD_FILE: MSMg01no343_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:59 2005
(464 letters)
>mm_chr9_76883203_76884063
Length = 861
Score = 733 bits (379), Expect = 0.0
Identities = 400/407 (98%), Gaps = 4/407 (0%)
Strand = Plus / Minus
Query: 58 aaaagaaaagaaaagaaaagaaaagaaaagaaaaggaaaaagaaaaatactggaggatta 117
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aaaa-aaaagaaaagaaaagaaaagaaaagaaaaggaaaaagaaaaatactggaggatta 648
Query: 118 tgtgatactattacagaggttgggtcctattacccttgcagtaggtatcagattggcaaa 177
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 647 tgtgatactattacagaggttgggtcctattacccttgcagtaggtgtcagattggcaaa 588
Query: 178 tcttaaatgttgtcacagtatgcaagaaaaagatcaatccgagaagactgggtccatgat 237
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 587 tcttaaatgttgtcacagtatgcaagaaaaagatcaatccgagaggactgggtccatgat 528
Query: 238 tgtctatggtctcctctgcaggagtaataaataaacatgaaccatgatgtgagaggtaca 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tgtctatggtctcctctgcaggagtaataaataaacatgaaccatgatgtgagaggtaca 468
Query: 298 gtgtgacactgaaacatcttagctaaccacgtaaactgaacactattagcataaccagtg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gtgtgacactgaaacatcttagctaaccacgtaaactgaacactattagcataaccagtg 408
Query: 358 tgaatgccttaaacctactgtgtttagaatcaagctgctaattttacccaaataaaaaag 417
|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 407 tgaatgccttaaacctactgtgtttagaatcaagctgctaattttacc-aaa-aaaaaa- 351
Query: 418 aaaaaaaaaaaaaccttccaagttgtatctttactatgctaattctc 464
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 350 aaaaaaaaaaaaaccttccaagttgtatcttcactatgctaattctc 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 861
Length adjustment: 10
Effective length of query: 454
Effective length of database: 851
Effective search space: 386354
Effective search space used: 386354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
