Query= MSMg01no344_i11.b1 MSMg01no344_i11.b1 CHROMAT_FILE:
MSMg01no344_i11.b1 PHD_FILE: MSMg01no344_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:44 2005
(563 letters)
>mm_chr9_89298307_89299270
Length = 964
Score = 1067 bits (552), Expect = 0.0
Identities = 561/564 (99%), Gaps = 1/564 (0%)
Strand = Plus / Plus
Query: 1 ttttttgtatgtattagatgcttctggcagttgaagtttatgaacatctcacatgggtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttttgtatgtattagatgcttctggcagttgaagtttatgaacatctcacatgggtgg 260
Query: 61 aggtttcaaatgcactatgaaatacatgggattataaaggaaaccaagagatagttatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtttcaaatgcactatgaaatacatgggattataaaggaaaccaagagatagttatta 320
Query: 121 aatacatgcactctctaagtagcaagatatagggggtcagttctcataaacacatacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatacatgcactctctaagtagcaagatatagggggtcagttctcataaacacatacatt 380
Query: 181 tcaaaaccatatgtggtataaacaatatattgaaatacacacaaaactgcaacgtggtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaaaccatatgtggtataaacaatatattgaaatacacacaaaactgcaacgtggtgt 440
Query: 241 gaaaataatcttaatttttactagtcaaagcgataggtaattcta-taatcctgtggttt 299
|||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 gaaaataagcataatttttactagtcaaagcgataggtaattctactaatcctgtggttt 500
Query: 300 cttggtaatttaacaaaaacctaagtttctgctggacgttaatggaaataaaaatgtagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttggtaatttaacaaaaacctaagtttctgctggacgttaatggaaataaaaatgtagc 560
Query: 360 tttttagcctacttaatagatagattactgaatatagttaaaaactcttgccagtgatta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttttagcctacttaatagatagattactgaatatagttaaaaactcttgccagtgatta 620
Query: 420 ctcgttaaataagacaccagtttggaggtgtgttatatgtgttactttgtgatcataata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcgttaaataagacaccagtttggaggtgtgttatatgtgttactttgtgatcataata 680
Query: 480 tgctgctcaattcttattttgttgattgcactgaagatagataatggacttctttccatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgctgctcaattcttattttgttgattgcactgaagatagataatggacttctttccatt 740
Query: 540 atctacggagatggttttctcatt 563
||||||||||||||||||||||||
Sbjct: 741 atctacggagatggttttctcatt 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 964
Length adjustment: 10
Effective length of query: 553
Effective length of database: 954
Effective search space: 527562
Effective search space used: 527562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_i11.g1 MSMg01no344_i11.g1 CHROMAT_FILE:
MSMg01no344_i11.g1 PHD_FILE: MSMg01no344_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:44 2005
(440 letters)
>mm_chr9_89472853_89473692
Length = 840
Score = 607 bits (314), Expect = e-178
Identities = 320/322 (99%)
Strand = Plus / Minus
Query: 117 actctcacacacagtcaccaaatcttagttgcttacaacagcaaaggtgtattgatgtcc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 actctcacacacagtcaccaaatcttagttgcttacaacagcaaaggtgtattgatgtcc 781
Query: 177 cacctggcatgttctttgtggtcagatgcagttttatttcatctcgtcatcacagaaacc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 cacctggcatgttctttgtggtcagatgcagttttatttcatctcgtcatcacagaaacc 721
Query: 237 aagctgaatgggcagcgtgtgtctaggacatgctggcctcatctcaggggaggaaagatg 296
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 720 aagctgaatgggcagcgtgtgtctaggagatgctggcctcatctcaggggaggaaagatg 661
Query: 297 gcagaattacatgctggttcttggcgcgcagtctatgtattcacatctcacggcaaagcc 356
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 660 gcagaattacatgctggttcttggcgcacagtctatgtattcacatctcacggcaaagcc 601
Query: 357 aaatcatagagccaagtctggtgtctacagtgtggaaacaaattctccattcatggaaca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaatcatagagccaagtctggtgtctacagtgtggaaacaaattctccattcatggaaca 541
Query: 417 cgtgagagaaatgagcttggta 438
||||||||||||||||||||||
Sbjct: 540 cgtgagagaaatgagcttggta 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
