NNNCCCCAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTTGCTTACTCTCCAGTCACTGAATTTAGGGCTTGTT
TTAATCCAGTATGGCCATGCCTCTAAACTTGATCCCATCTAGAAATATCC
TGGTTTCAGATGTTATATTTCGGTCATTACGACTGTAACTTACCTTCTGT
GCAGGATGCAATTCAACCTCAACCGTGCTGTGGAGAGAACTGGCCGTTAA
CAAGACAAAGATGAGGATGACAGTGTCTGTGTAGATGCCTGGGAAAAGGG
CAAGGCTGAGCTTGGGAGGCACATTTTTTGGAGGGCTTCTGGATATTTTC
ACGTGTCGGATCCTCTGTTACTTTTTCTCCTTTAAAATGTGATCACCTTT
TGTCTTTGACATTTTCATTTCAGGGGCCCTATAGACTGTTATTGTCTGAG
GACGCTATTTATTGATTAACCTGCTTTTTTTTTTTAATGATAGGATTTGA
AATTAGATGCAGATTGACTAATGTAGCTGCCCCTTGAAGGAAATCTGTAC
CCTTTCCCCGCATTTTCTCTAATGCTTCATCAAAACTAAATGTGTGAATG
CCACTAAATACCAGATGAATTTGACTATTTTTGCTTGAATAATTTCTCTT
GTTTTTCTTATATAAATTCCTTTGCCAATCGCTTTTTTTTTTCTCCCCAC
TATT

TCATTGTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTATTTGACCGCGGAATTCTCATTCTTTTTAGAAAGGGGAAAGA
ACTGTGAATTGATAGTACCCCATGGAGGAAAACTCACTTTCCAACCAATT
GCAGGTGGTTTTGTAAATTAGATTCACCTCGAGATGTCTCAACCCACATA
TTACTTTCTGCTATTGATTTACTGAACCTGTCCTATTATCTCTCTGGGAC
ATTTACCCTTTATGAGAAAATCTTCTCTAACTACAGAACTTTCCTCTTCA
TATAATAGTATTATTTTTATTCGATTACTGTTACCTTCTGCTTCTGTCTA
AAAACATATGGAACGCTTTCTCTGTTCTGTGGCGGCTGGTCAAACAATAA
AGAAATTCTTTTATGGCAGCTGTGTCCTCACACACATATGGTCTATGTCT
TTCCTTCCACTTCTTAAACAAGCGCGATAGATTGCTCAATCCCTCTTACG
ACGTACCACGTATCTTAAACCTTTCGCTCTTCGAATATTTTCTCGGTTTA
ATCGTTTTTACCATGACCCGTCTTATAACATTTTTCTTCCATTTTTTTAC
CTTATTTATTCCTATTATATCAATTAAACCTCTTTACATCCACCCCACTC
TTCCAACTTCTATCCTTCACCCATCCTACCTTTTTTTTTTTTTATCTAAC
ATCATCTTACTTTCGTTATTT

Query= MSMg01no344_m09.b1 MSMg01no344_m09.b1 CHROMAT_FILE:
MSMg01no344_m09.b1 PHD_FILE: MSMg01no344_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:03 2005
         (432 letters)



>mm_chr9_85826913_85827744
          Length = 832

 Score =  739 bits (382), Expect = 0.0
 Identities = 418/436 (95%), Gaps = 14/436 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtcactgaatttagggcttgttttaatccagtatggccatgcctctaaacttgatccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 629 agtcactgaatttagggcttgttttaatccagtatggccatgcctct-aacttgatccca 571

                                                                       
Query: 61  tctagaaatatcctggtttcagatgttatatttcggtcattacgactgtaacttaccttc 120
           |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 570 tctagaaatatcctggtttcagatgttatatttcagtcattacgactgtaacgtaccttc 511

                                                                       
Query: 121 tgtgcaggatgcaattcaacctcaaccgtgctgtggagagaactggccgttaacaagaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgtgcaggatgcaattcaacctcaaccgtgctgtggagagaactggccgttaacaagaca 451

                                                                       
Query: 181 aagatgaggatgacagtgtc--tgtgtagatgcctgggaaaagggcaaggctgagcttgg 238
           ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aagatgaggatgacagtgtctgtgtgtagatgcctgggaaaagggcaaggctgagcttgg 391

                                                                       
Query: 239 gaggcacatttttt-----ggagggcttctggatattttcacgtgtcggatcctctgtta 293
           ||||||||     |     ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 390 gaggcaca-----tagcagggagggcttctgggtattttcacgtgtcggatcctctgtta 336

                                                                       
Query: 294 ctttttctcctttaaaatgtgatcaccttttgtctttgacattttcatttcaggggccct 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctttttctcctttaaaatgtgatcaccttttgtctttgacattttcatttcaggggccct 276

                                                                       
Query: 354 atagactgttattgtctgaggacgctatttattgattaacctgctttttttttttaatga 413
           ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 275 atagactgttattgtctgaagacgctatttattgattaacctgc-ttttttttttaatga 217

                           
Query: 414 taggatttgaaattag 429
           ||||||||||||||||
Sbjct: 216 taggatttgaaattag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)