GGGGCGGCGTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCATTTATATAACACCCAATTTTTAGATTCTTTTTAT
ATTTTTTAAAAATTCTGTCATGAACTATATAAATTCAGTTATATTCAGAA
TAAAACAGCTCTTCACTTTATTTACCAAATAGAACATTGCTCAAAGTGAA
AGGACTTAGGATTTTCTCATAGAAGTAAATCAGATAACTAGAAAGGAGGG
CTGAACTCATAAATATTTAAAGCATAAACAGCTTAACATTTGTGGTCTGA
CGGAATTTATTTGTTCACTTTTTTAAAAGACAGATTTCTTAAACATTCTA
ATGAGGGGGAAATTTTCTTTCATAATACTGCTGATTTAAGAACTGCTACA
TACACGCCAGTAGCCAATTTTCATGATCAGAAATGGTATTATGTCAACAC
AAAGGTTGAGCTGGACACATCAGCTTTTCAACAGGAGAAATATCAGTGCG
GCATTTGAAGGCAGCACAAAGTCTCCTGATAAACTAATGGCTACTTTTTC
ACAAAAAAATTAGCGCAATCTTTATGGACTGACTGATACCACTTCCTTAC
ATTTTAATCATCAACTTTGATTATGCACAAAGCATGACCATAAACAATGA
GGTTATTGTTATTTCCTTGCCAAAGTTCATTTTGTATAAATCAGTTGCAT
CAGCATTTGTTCTCAAACTATGAAGTTCTGTAAGAAN

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTCAATGCGATATATTGTTTCTTTAC
ACTTGAGGTTCTGTGAAAGGACAGAAAGACTGAAATTACCAGGAACCAAC
CACCAGGTAGTAGAGGCACATGACTGTGACCCTAGCACTTGGGGGTGGGG
GATGGAGGACCTGGAGCTCAAGGTTATCCTCAGCTACATTTCCAGGCCAG
CCAGTAAAACCTGCCACGAGACAAGAATCTTTAGGAAAATCTAACATTAT
AATGAATTAGGAGCAGTAGAACTGTTGATTCTGAGGCTTTTCCTCCTCCT
CGTCCTCCTCGTCCTCCTCGTCCTCCTCGTCCTCCTCGTCCTCCTCCTCC
TCCTTCTTTTTTCTGAGACAGGGTTTCTCTGTCTAGCCCTGGCTGTCGTG
GAACTCGCTTTGTAGACCAGGCTGACCTTGAACTCAGAAATCCGCCTTCC
TCTGCCTCCCGAGTGCTGGTATTAACAGCTTGTGGCGCCACCACGCCTGG
CTTTTTTTTTTTTTTTTAACGCACCACCTCCATTTTATTTTTTCAGTGTA
TGTTTTCCTTCCTGCCCTTAACAAAACCTCTCTCCTTTTCCTGTGTATTC
TGTAGGTTTGTCCTTCGCCCCTTTGCCTCAACCCGAGTTAGTGTTTTTTC
TTATATACCTCTTCTTGATTTTTTTTCATAATCGGATCCTTTG

Query= MSMg01no344_p08.b1 MSMg01no344_p08.b1 CHROMAT_FILE:
MSMg01no344_p08.b1 PHD_FILE: MSMg01no344_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:18 2005
         (594 letters)



>mm_chr9_101004522_101005515
          Length = 994

 Score = 1125 bits (582), Expect = 0.0
 Identities = 591/594 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caatttttagattctttttatattttttaaaaattctgtcatgaactatataaattcagt 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 caatttttagattatttttatattttttaaaaattctgtcatgaactatataaattcagt 770

                                                                       
Query: 61  tatattcagaataaaacagctcttcactttatttaccaaatagaacattgctcaaagtga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tatattcagaataaaacagctcttcactttatttaccaaatagaacattgctcaaagtga 710

                                                                       
Query: 121 aaggacttaggattttctcatagaagtaaatcagataactagaaaggagggctgaactca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aaggacttaggattttctcatagaagtaaatcagataactagaaaggagggctgaactca 650

                                                                       
Query: 181 taaatatttaaagcataaacagcttaacatttgtggtctgacggaatttatttgttcact 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 649 taaatatttaaagcataaacagcttaacatttgtggtctgatggaatttatttgttcact 590

                                                                       
Query: 241 tttttaaaagacagatttcttaaacattctaatgagggggaaattttctttcataatact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tttttaaaagacagatttcttaaacattctaatgagggggaaattttctttcataatact 530

                                                                       
Query: 301 gctgatttaagaactgctacatacacgccagtagccaattttcatgatcagaaatggtat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gctgatttaagaactgctacatacacgccagtagccaattttcatgatcagaaatggtat 470

                                                                       
Query: 361 tatgtcaacacaaaggttgagctggacacatcagcttttcaacaggagaaatatcagtgc 420
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tatgtcagcacaaaggttgagctggacacatcagcttttcaacaggagaaatatcagtgc 410

                                                                       
Query: 421 ggcatttgaaggcagcacaaagtctcctgataaactaatggctactttttcacaaaaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcatttgaaggcagcacaaagtctcctgataaactaatggctactttttcacaaaaaaa 350

                                                                       
Query: 481 ttagcgcaatctttatggactgactgataccacttccttacattttaatcatcaactttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttagcgcaatctttatggactgactgataccacttccttacattttaatcatcaactttg 290

                                                                 
Query: 541 attatgcacaaagcatgaccataaacaatgaggttattgttatttccttgccaa 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 attatgcacaaagcatgaccataaacaatgaggttattgttatttccttgccaa 236


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)