Query= MSMg01no344_p19.b1 MSMg01no344_p19.b1 CHROMAT_FILE:
MSMg01no344_p19.b1 PHD_FILE: MSMg01no344_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:20 2005
(243 letters)
>mm_chr9_71312683_71313325
Length = 643
Score = 445 bits (230), Expect = e-129
Identities = 243/254 (95%), Gaps = 11/254 (4%)
Strand = Plus / Minus
Query: 1 atgcttttgttcactttcttccatattccaagtactgaagtcatttgaaggtctatactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgcttttgttcactttcttccatattccaagtactgaagtcatttgaaggtctatactc 253
Query: 61 acagggcttaggcacatcaccagctaatgctgtgttgccttgagtgctagtttttgtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 acagggcttaggcacatcaccagctaatgctgtgttgccttgagtgctagtttttgtttg 193
Query: 121 tttgtttgtttgtttgttaaccatgactttt-----------tttttttaagatgtattt 169
||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 192 tttgtttgtttgtttgttaaccatgacttttctttctttttttttttttaagatgtattt 133
Query: 170 tatctatgtaagtacattgtccttcttctcggacacaccagaggagggcatcagatccca 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tatctatgtaagtacattgtccttcttctcggacacaccagaggagggcatcagatccca 73
Query: 230 ttacagatggttgt 243
||||||||||||||
Sbjct: 72 ttacagatggttgt 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no344_p19.g1 MSMg01no344_p19.g1 CHROMAT_FILE:
MSMg01no344_p19.g1 PHD_FILE: MSMg01no344_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:21 2005
(102 letters)
>mm_chr9_71208372_71208873
Length = 502
Score = 149 bits (77), Expect = 4e-41
Identities = 95/101 (94%)
Strand = Plus / Plus
Query: 2 ttaatataaaccagtaactagaaagtcccttagcttactcattagactacactttcgaga 61
||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||
Sbjct: 202 ttaatataaaccagtaactagaaagtcccttggcttaatcattaaactacactttcaaga 261
Query: 62 tgtcggcattagggagagcttggtgaacacacaggtgcagc 102
|||||| |||||||| |||||||||||||||||||||||||
Sbjct: 262 tgtcggtattagggaaagcttggtgaacacacaggtgcagc 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 102
Length of database: 502
Length adjustment: 8
Effective length of query: 94
Effective length of database: 494
Effective search space: 46436
Effective search space used: 46436
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
