NTTTGCAATTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAG
AGGATCCGCGGAATTCACTTTGTATACCAGGCTGTCCTCCAACTCAGAAA
TCCATCTGCCTCTGCCTCCCGAGTACTGGGATTAAAGGCGTGCGCCACCA
CGCCCAGCTTTGCATTGAATTTTTTAATGAGTGTGTGTGTGTGTTTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTNNNNCNNNNNTTCTNCCCCTTC
TTTCTCTCTTTCTTTTTTTTTTCCTCTCCCTCTTTTTTTCTTTCCCTTCC
TTCTTTTCCTTTTTTCCTTTCCCTTTTTTTTTTTTTCTTCCCTCTCTCCC
TCTTTTCTCTTTTATTTCTTTTTTTCTTCTTCCTTTTCTTTCCTCATTTT
TTCTCTTTTTTTTTTTTTCTCCCCCCCCCCCCCTCTTTCTCTCTCCTTTT
TCTCCTTTTCCTTCTTCTTCCCCTTCTCTTCTTTTTTTCCTTTCTTCTTC
CTTCTTCCTCCTTCTCCTTTCTCCTCCTCTTCTCTTATTTTTTTAATATA
CCTCCCTTATACCATTTTTTTATCTTCAATCATAATTTTAACCTCTCTAA
CTTTTCTCAATATTTTTTACTTTCTTCTTATTACCCTTACACCATCCTCA
TTACTCTTTTTTACTCCTTCTACTCTTCTATTATCTCTTACCTTACTCTC
TTTTCATTCTCTTCCCTTCTTCCATCCCCTTTAACACCATTCCCTTTATC
TTTCTTTTTACTCATTCTCATTCAATTAATTATTATCTACN

TTTATATTTTCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAGTCTGCTGGT
CTTTAGACTTCAATATTGCAGGGCAATCAGCAAACATTACTAACATCAGT
AACAAACCTAAGAGACCTTCCTACAGGGTGGGAGCCTAGAACAGATAGGG
TCAGACCTGGGGGCTCCTGGGATGAGCTGACCCAATGTTTTCTAGACATT
ATTAGACTTTCAGCAAAAACAAACAGCAAAGCAGTGGTAATTGCTAGGCC
ATTGTTAGGTAAGTGTTAGGAAAATTTCCCATTAAATAAGCTTGCTTACT
TCAGGACCTCCTTAAGCTATTAATACAGTGTGATAAGTTGTGGCGTTTCA
AGAGTATTATATTCGTGATTTCCTGAACACATCTTGCTAGAGGACACAGA
ATGGAATGTGAAGATGGGGAGATAACTCATCAGAGAAGGGCACTGCCCCT
GCAACATGGGGGCCTGAGTTCAGATCCCAGCACCTATGTAAGAAGCTGGG
CAATTTTACAACCTCAGCCCTCCATTGTCTGCGACCACAGCAATGTAGGG
AAGTTGGGAAATGAAGACAAGAGTATTGAGGCTTACAGGGCTTTAACCCC
CTTTTGGGTTCCCCTGAGAAAACAACGTGCCTCCAAGGAGGAAAGGGGAA
AATTTTAATATCTTGGACTCCCCTTCTCCCTTTTGGCTTTCAACCATAAA
ACCAG

Query= MSMg01no345_a16.g1 MSMg01no345_a16.g1 CHROMAT_FILE:
MSMg01no345_a16.g1 PHD_FILE: MSMg01no345_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:25 2005
         (476 letters)



>mm_chr9_83576124_83576999
          Length = 876

 Score =  845 bits (437), Expect = 0.0
 Identities = 467/477 (97%), Gaps = 2/477 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttagtctgctggtctttagacttcaatattgcagggcaatcagcaaacattactaacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttagtctgctggtctttagacttcaatattgcagggcaatcagcaaacattactaacat 260

                                                                       
Query: 61  cagtaacaaacctaagagaccttcctacagggtgggagcctagaacagatagggtcagac 120
           |||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 cagtaacaagtctaagagaccttcctacagggtgggagcctaggacagatagggtcagac 320

                                                                       
Query: 121 ctgggggctcctgggatgagctgacccaatgttt-tctagacattattagactttcagca 179
           |||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||
Sbjct: 321 ctgggggctcctgggatgagctgacccaatgtttgt-tagacattattagacttttagca 379

                                                                       
Query: 180 aaaacaaacagcaaagcagtggtaattgctaggccattgttaggtaagtgttaggaaaat 239
           |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 380 aaaacaaacagcaaagcagtggtaattgttaggtcattgttaggtaagtgttaggaaaat 439

                                                                       
Query: 240 ttcccattaaataagcttgcttacttcaggacctccttaagctattaatacagtgtgata 299
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcccagtaaataagcttgcttacttcaggacctccttaagctattaatacagtgtgata 499

                                                                       
Query: 300 agttgtggcgtttcaagagtattatattcgtgatttcctgaacacatcttgctagaggac 359
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 agttgtggcgtttcaagagtattatattcgtgatttcctcaacacatcttgctagaggac 559

                                                                       
Query: 360 acagaatggaatgtgaagatggggagataactcatcagagaagggcactgcccctgcaac 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acagaatggaatgtgaagatggggagataactcatcagagaagggcactgcccctgcaac 619

                                                                    
Query: 420 atgggggcctgagttcagatcccagcacctatgtaagaagctgggcaattttacaac 476
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgggggcctgagttcagatcccagcacctatgtaagaagctgggcaattttacaac 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space:   403556
Effective search space used:   403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)