XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTT
ATGCTCACAGGGCTACAAACACAAGTCAATGAAAGCTGGGCAGGCTTCTG
GGGCAAACTAGGGAGGTGTGGGGTGTAAAGGGACCTGGACTCTTAGCTAG
GGCCTTGTCAAGGTGAGACCTCTGGCCTCCGACTTCATAGATAGATGAGA
TATGAGGTAGAAAGGAGACACTAAGGGAGCCAAGTGCTCAAAAGGCACAG
ACGGACTAGATAGCAGAGTGACCTGCGAATAAAGAGGAAAGGACCAGAGC
TGCCAGACTTGCTCTTGAATCAAACCCTGGCAGGACAAACTGAGGCAGGA
GGCAAGACTGACAGCCAGTTTGCCAATGGAAATGCAGGAGGAGTTGTGGT
ACCTAAAGTGAAGGTGGGCGGGGCAATCCCCCCAAGGTTATAAACCAACT
CAAGCTTCAAAGTAGGCCAGTGACTGAGTTTGATATCAACACGAACACTG
GCTAGGTTTTGTTTTTTAACAGAATACAACTTTAGCTTTTTATCTGTCTC
CTAGATCCTTTATAAGTAACAGTCTGTTAAAAAGAAAAGCTAGAACCTAC
CTTTCAATACTTCATTTCTTAATTACTTATTCTGCTCATCGCAGTGTGTG
AAGGTTCGTTACTCTTTTTTTTAAATTTTTCAAAATTGGTCTACTCTGTT
TTTTCCTGACATCTCT

TGATGAGAGAGCGGGGGCGCGGCTGGCTTCCACATTTGANNGACACTATA
GAAGGTTGCAGAGAAAGGGAGATCTACCTGCCTCTCTCTCTTTCCTTCCC
TCCCCCTCCTCCCTCCCTTCCCTCCCCCCTCTCCCTCCCTCCCTTCCTCT
TCCTCTCCTCTCCCTCACTGCCCCCCTTTTCTGCCTCTTTCTGCCATTCA
ATTCATTCAGATCTTGCATTTACTTAATTCTCCTTTGATACATATTTTTT
ATAATTTAATCTAAATGATAAACTGTTGTAATTTGTGAGGGGAATGAGCT
ACTTTAACTTTTTGATTTTTTGACCTCACAGACGGTGAACTTAAACATCT
ATTTTTTTTTCCCCACCTACCCACGGGGGATTAAGATTACACCACAAGTG
ATGTGCTACTCACCTGTGACATTTCTTAAGTCAATACACCGTAAACTGAA
TAAAACCTTAGAAAATATAAATTTGTAACAATATCAACTATAAATAATAT
TAAATTGGGTTAATATCTTAATTGTTTAAAATACGGTTTTCCCTTAATAG
AAAATTATGAAAAAATCGATAAAACAAAATACACATATTTAATATGTACA
TTTCATTAATTTATGATACAACAAAAAAAAAAATATCAAAACTACCAAAT
ATTTATATACACTATCTGAATTATAACCTGTTTAACATGCGAAACGAAGA
AAGAAAAAATTTTATATTTATATCCCGCCCATAGCGAGAACACAACCCTT
ATAAAAAATTTTTTATGGACAATATAAAATTAGAAGAAAAATATAAATAA
TATTN

Query= MSMg01no345_i05.b1 MSMg01no345_i05.b1 CHROMAT_FILE:
MSMg01no345_i05.b1 PHD_FILE: MSMg01no345_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:58 2005
         (484 letters)



>mm_chr9_53173268_53174151
          Length = 884

 Score =  897 bits (464), Expect = 0.0
 Identities = 476/480 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacttatgctcacagggctacaaacacaagtcaatgaaagctgggcaggcttctg 64
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttatgcccatagggctacaaacacaagtcaatgaaagctgggcaggcttctg 264

                                                                       
Query: 65  gggcaaactagggaggtgtggggtgtaaagggacctggactcttagctagggccttgtca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggcaaactagggaggtgtggggtgtaaagggacctggactcttagctagggccttgtca 324

                                                                       
Query: 125 aggtgagacctctggcctccgacttcatagatagatgagatatgaggtagaaaggagaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggtgagacctctggcctccgacttcatagatagatgagatatgaggtagaaaggagaca 384

                                                                       
Query: 185 ctaagggagccaagtgctcaaaaggcacagacggactagatagcagagtgacctgcgaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaagggagccaagtgctcaaaaggcacagacggactagatagcagagtgacctgcgaat 444

                                                                       
Query: 245 aaagaggaaaggaccagagctgccagacttgctcttgaatcaaaccctggcaggacaaac 304
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 445 aaagaggaaaggaccagagctgccagacttgctcaggaatcaaaccctggcaggacaaac 504

                                                                       
Query: 305 tgaggcaggaggcaagactgacagccagtttgccaatggaaatgcaggaggagttgtggt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgaggcaggaggcaagactgacagccagtttgccaatggaaatgcaggaggagttgtggt 564

                                                                       
Query: 365 acctaaagtgaaggtgggcggggcaatccccccaaggttataaaccaactcaagcttcaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acctaaagtgaaggtgggcggggcaatccccccaaggttataaaccaactcaagcttcaa 624

                                                                       
Query: 425 agtaggccagtgactgagtttgatatcaacacgaacactggctaggttttgttttttaac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtaggccagtgactgagtttgatatcaacacgaacactggctaggttttgttttttaac 684


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space:   414276
Effective search space used:   414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)