MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-346L14
Chromosome	9 (Build37)
Map Location	18,475,969 - 18,476,421
singlet/doublet	singlet
Overlap gene	Muc16
Upstream gene	LOC244710, LOC100040508, EG665548, LOC665554, LOC665567, Chordc1, Naalad2, B020006M18Rik, Map1lc3-ps, Mbd3l2, Zfp558, Mbd3l1
Downstream gene	Olfr24, Olfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC244710 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:244710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 84 ESTs, 13 Proteins pseudo : _no_value

name	LOC100040508 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040508
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins pseudo : _no_value

name	EG665548 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665548 MGI:3646083
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC665554 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 Proteins pseudo : _no_value

name	LOC665567 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665567
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Chordc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66917 MGI:1914167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Naalad2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72560 MGI:1919810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B020006M18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546118 MGI:3588290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map1lc3-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434375
definition	note : microtubule-associated protein 1 light chain 3 pseudogene pseudo : _no_value

name	Mbd3l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234988 MGI:2158460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp558 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72230 MGI:1921681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs

name	Mbd3l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73503 MGI:1920753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Muc16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73732 MGI:1920982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein

name	Olfr24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18322 MGI:109311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr828 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258598 MGI:3030662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr829 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259070 MGI:3030663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr830 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258559 MGI:3030664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr831-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404431 MGI:3030665
definition	note : olfactory receptor 831, pseudogene 1 pseudo : _no_value

name	Olfr832 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258075 MGI:3030666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	GA_x5J8B7W6RL5-13870817-13871726 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:257755
definition	note : olfactory receptor GA_x5J8B7W6RL5-13870817-13871726 pseudo : _no_value

name	Olfr834 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258074 MGI:3030668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr835 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257872 MGI:3030669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr836 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258557 MGI:3030670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr837 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258558 MGI:3030671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	GA_x5J8B7W6RL5-13695863-13696754 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:257756
definition	note : olfactory receptor GA_x5J8B7W6RL5-13695863-13696754 pseudo : _no_value

name	Olfr839-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258184 MGI:3030673
definition	gene_synonym : MOR152-4P note : olfactory receptor 839, pseudogene 1 pseudo : _no_value

name	GA_x5J8B7W6RL5-13645512-13646298 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:257757
definition	note : olfactory receptor GA_x5J8B7W6RL5-13645512-13646298 pseudo : _no_value

name	Olfr841-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258072 MGI:3030675
definition	gene_synonym : MOR266-7P note : olfactory receptor 841, pseudogene 1 pseudo : _no_value

name	Olfr842-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258073 MGI:3030676
definition	gene_synonym : MOR154-2P; MOR154-3_p note : olfactory receptor 842, pseudogene 1 pseudo : _no_value

name	Olfr843 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258560 MGI:3030677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr845 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258249 MGI:3030679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1522-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258176 MGI:3031356
definition	gene_synonym : MOR150-1P note : olfactory receptor 1522, pseudogene 1 pseudo : _no_value

name	Olfr846 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258279 MGI:3030680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665697 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Olfr847 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258518 MGI:3030681
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	GA_x5J8B7W6RL5-13451244-13452122 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:257758
definition	note : olfactory receptor GA_x5J8B7W6RL5-13451244-13452122 pseudo : _no_value

name	Olfr849 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258520 MGI:3030683
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr850 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258516 MGI:3030684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr851 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258907 MGI:3030685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr852-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404436 MGI:3030686
definition	note : olfactory receptor 852, pseudogene 1 pseudo : _no_value

name	Olfr853 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258908 MGI:3030687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr854 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258515 MGI:3030688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr855 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258517 MGI:3030689
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp75 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244713 MGI:107775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624341 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624341 MGI:3645477
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2105 Proteins

name	Chordc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388480 GeneID:66917 MGI:1914167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 transcript_id : NM_025844.2

name	Naalad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130446 GeneID:72560 MGI:1919810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acetylated alpha-linked acidic dipeptidase 2 transcript_id : NM_028279.3

name	B020006M18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382722 GeneID:546118 MGI:3588290
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B020006M18 gene transcript_id : NM_001033793.2

name	Mbd3l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40538831 GeneID:234988 MGI:2158460
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyl-CpG binding domain protein 3-like 2 transcript_id : NM_144934.2

name	Zfp558 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386001 GeneID:72230 MGI:1921681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs product : zinc finger protein 558, transcript variant 1 transcript_id : XM_356228.4

name	Mbd3l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387268 GeneID:73503 MGI:1920753
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyl-CpG binding domain protein 3-like 1 transcript_id : NM_028557.2

name	Muc16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259833 GeneID:73732 MGI:1920982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein product : mucin 16 transcript_id : XM_911929.3

name	Olfr24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33238877 GeneID:18322 MGI:109311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 24 transcript_id : NM_146606.1

name	Olfr828 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239271 GeneID:258598 MGI:3030662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 828 transcript_id : NM_146605.1

name	Olfr829 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128822 GeneID:259070 MGI:3030663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 829 transcript_id : NM_147067.1

name	Olfr830 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129510 GeneID:258559 MGI:3030664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 830 transcript_id : NM_146566.1

name	Olfr832 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58801411 GeneID:258075 MGI:3030666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 832 transcript_id : NM_001011824.1

name	Olfr834 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58801409 GeneID:258074 MGI:3030668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 834 transcript_id : NM_001011823.1

name	Olfr835 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59676582 GeneID:257872 MGI:3030669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 835 transcript_id : NM_001012266.1

name	Olfr836 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129514 GeneID:258557 MGI:3030670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 836 transcript_id : NM_146564.1

name	Olfr837 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129516 GeneID:258558 MGI:3030671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 837 transcript_id : NM_146565.1

name	Olfr843 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129512 GeneID:258560 MGI:3030677
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 843 transcript_id : NM_146567.1

name	Olfr845 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46369496 GeneID:258249 MGI:3030679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 845 transcript_id : NM_207145.1

name	Olfr846 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129722 GeneID:258279 MGI:3030680
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 846 transcript_id : NM_146282.1

name	Olfr847 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239265 GeneID:258518 MGI:3030681
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 847 transcript_id : NM_146525.1

name	Olfr849 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239267 GeneID:258520 MGI:3030683
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 849 transcript_id : NM_146527.1

name	Olfr850 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239273 GeneID:258516 MGI:3030684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 850 transcript_id : NM_146523.1

name	Olfr851 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112982692 GeneID:258907 MGI:3030685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 851 transcript_id : NM_146905.2

name	Olfr853 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129072 GeneID:258908 MGI:3030687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 853 transcript_id : NM_146906.1

name	Olfr854 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239275 GeneID:258515 MGI:3030688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 854 transcript_id : NM_146522.1

name	Olfr855 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239269 GeneID:258517 MGI:3030689
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 855 transcript_id : NM_146524.1

name	Zfp75 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254382 GeneID:244713 MGI:107775
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 75 transcript_id : NM_172918.3

name	EG624341 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259839 GeneID:624341 MGI:3645477
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2105 Proteins product : predicted gene, EG624341 transcript_id : XM_888877.3

name	Chordc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385324 CCDS:CCDS22842.1 GeneID:66917 MGI:1914167
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IDA] codon_start : 1 product : cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 protein_id : NP_080120.1

name	Naalad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138552 GeneID:72560 MGI:1919810
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0017165 - dipeptidase E activity [Evidence IDA]; GO:0009980 - glutamate carboxypeptidase activity [Evidence IDA]; GO:0043275 - glutamate carboxypeptidase II activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042135 - neurotransmitter catabolism [Evidence IDA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : glutamate carboxypeptidase III; NAAG-peptidase II product : N-acetylated alpha-linked acidic dipeptidase 2 protein_id : NP_082555.2

name	B020006M18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702117 GeneID:546118 MGI:3588290
definition	codon_start : 1 product : hypothetical protein LOC546118 protein_id : NP_001028965.1

name	Mbd3l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40538832 CCDS:CCDS22844.1 GeneID:234988 MGI:2158460
definition	codon_start : 1 exception : mismatches in translation product : methyl-CpG binding domain protein 3-like 2 protein_id : NP_659183.2

name	Zfp558 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82929650 GeneID:72230 MGI:1921681
definition	codon_start : 1 product : zinc finger protein 558 isoform 1 protein_id : XP_356228.3

name	Mbd3l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312108 CCDS:CCDS22845.1 GeneID:73503 MGI:1920753
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0008327 - methyl-CpG binding [Evidence ISS] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : methyl-CpG binding domain protein 3-like product : methyl-CpG binding domain protein 3-like 1 protein_id : NP_082833.1

name	Muc16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259834 GeneID:73732 MGI:1920982
definition	codon_start : 1 product : mucin 16 protein_id : XP_917022.3

name	Olfr24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238878 CCDS:CCDS22846.1 GeneID:18322 MGI:109311
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12498544-12497603; olfactory receptor MOR132-1 product : olfactory receptor 24 protein_id : NP_666817.1

name	Olfr828 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239272 GeneID:258598 MGI:3030662
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12559294-12558356; olfactory receptor MOR149-1 product : olfactory receptor 828 protein_id : NP_666816.1

name	Olfr829 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128823 CCDS:CCDS22847.1 GeneID:259070 MGI:3030663
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12599710-12600648; olfactory receptor MOR147-1 product : olfactory receptor 829 protein_id : NP_667278.1

name	Olfr830 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129511 CCDS:CCDS22848.1 GeneID:258559 MGI:3030664
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12618399-12619337; olfactory receptor MOR152-1 product : olfactory receptor 830 protein_id : NP_666777.1

name	Olfr832 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58801412 CCDS:CCDS22849.1 GeneID:258075 MGI:3030666
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12687800-12688738; olfactory receptor MOR153-1 product : olfactory receptor 832 protein_id : NP_001011824.1

name	Olfr834 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58801410 CCDS:CCDS22850.1 GeneID:258074 MGI:3030668
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12724921-12725859; olfactory receptor MOR153-2 product : olfactory receptor 834 protein_id : NP_001011823.1

name	Olfr835 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59676583 CCDS:CCDS22851.1 GeneID:257872 MGI:3030669
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12771995-12772930; GA_x5J8B7TUND4-2-664; GA_x5J8B7TUND5-1082-669; olfactory receptor MOR150-3 product : olfactory receptor 835 protein_id : NP_001012266.1

name	Olfr836 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129515 CCDS:CCDS22852.1 GeneID:258557 MGI:3030670
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12857805-12858749; olfactory receptor MOR152-3 product : olfactory receptor 836 protein_id : NP_666775.1

name	Olfr837 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129517 GeneID:258558 MGI:3030671
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-12873838-12874776; olfactory receptor MOR152-2 product : olfactory receptor 837 protein_id : NP_666776.1

name	Olfr843 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129513 CCDS:CCDS22853.1 GeneID:258560 MGI:3030677
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PVTD-12986331-12985390; olfactory receptor MOR155-2 product : olfactory receptor 843 protein_id : NP_666778.1

name	Olfr845 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46369497 CCDS:CCDS22854.1 GeneID:258249 MGI:3030679
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-13076685-13077623; olfactory receptor MOR150-2 product : olfactory receptor 845 protein_id : NP_997028.1

name	Olfr846 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129723 CCDS:CCDS22855.1 GeneID:258279 MGI:3030680
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-13098546-13097608; olfactory receptor MOR149-3 product : olfactory receptor 846 protein_id : NP_666394.1

name	Olfr847 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239266 CCDS:CCDS22856.1 GeneID:258518 MGI:3030681
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-13113073-13112135; olfactory receptor MOR149-2 product : olfactory receptor 847 protein_id : NP_666736.1

name	Olfr849 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239268 CCDS:CCDS22857.1 GeneID:258520 MGI:3030683
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-13176842-13177780; olfactory receptor MOR151-1 product : olfactory receptor 849 protein_id : NP_666738.1

name	Olfr850 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239274 CCDS:CCDS22858.1 GeneID:258516 MGI:3030684
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-13214162-13213224; olfactory receptor MOR147-2 product : olfactory receptor 850 protein_id : NP_666734.1

name	Olfr851 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112982693 CCDS:CCDS22859.1 GeneID:258907 MGI:3030685
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-13234278-13235216; olfactory receptor MOR155-1 product : olfactory receptor 851 protein_id : NP_667116.2

name	Olfr853 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129073 CCDS:CCDS22860.1 GeneID:258908 MGI:3030687
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-13277703-13276786; olfactory receptor MOR154-1 product : olfactory receptor 853 protein_id : NP_667117.1

name	Olfr854 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239276 CCDS:CCDS22861.1 GeneID:258515 MGI:3030688
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-13313295-13312357; olfactory receptor MOR147-3 product : olfactory receptor 854 protein_id : NP_666733.1

name	Olfr855 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239270 GeneID:258517 MGI:3030689
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PVTD-13330461-13331399; olfactory receptor MOR148-1 product : olfactory receptor 855 protein_id : NP_666735.1

name	Zfp75 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254383 CCDS:CCDS22862.1 GeneID:244713 MGI:107775
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger protein 75 protein_id : NP_766506.3

name	EG624341 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259840 GeneID:624341 MGI:3645477
definition	codon_start : 1 product : similar to olfactory receptor Olr1158 protein_id : XP_893970.3

name	EG665548 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665548
definition	number : 1 pseudo : _no_value

name	EG665548 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665548
definition	number : 2 pseudo : _no_value

name	LOC665554 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665554
definition	number : 1 pseudo : _no_value

name	LOC665554 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665554
definition	number : 2 pseudo : _no_value

name	LOC665567 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665567
definition	number : 1 pseudo : _no_value

name	LOC665697 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665697
definition	number : 1 pseudo : _no_value

name	LOC244710 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259832 GeneID:244710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 84 ESTs, 13 Proteins product : similar to eukaryotic translation elongation factor 1 alpha 1 pseudo : _no_value transcript_id : XR_031556.1

name	LOC100040508 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259842 GeneID:100040508
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_031819.1

clone name	MSMg01-462H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290K18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-082E06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-085P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130F19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-380F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295B20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-346L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154E02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542H13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-235H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498P13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-418O04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-475M03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-531F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-060I10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-067F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-354G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-544D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-346L14.T7 (MSMg01no346_l14.b1)	MSMg01-346L14.TJ (MSMg01no346_l14.g1)
ACC	AG459242	AG459243
length	734	743
length of high quality (start - end)	449 (56 - 504)	521 (66 - 586)
definition	CHROMAT_FILE: MSMg01no346_l14.b1 PHD_FILE: MSMg01no346_l14.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:37:29 2005	CHROMAT_FILE: MSMg01no346_l14.g1 PHD_FILE: MSMg01no346_l14.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:37:29 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGCA TTATCCATTGGACTCCAATATCTACTGATCCCGTTATTCATGAGAGATCT TTTCAGACTTCAAATTGATACTCAATATTAAAGGTATCACCAAAACCTAT AAAACATAATGTTTGTTTTTAGCCTCTACATACTTGACTACATTGAACAT AAACTAGGCACAATAAGTTAACAATAATGAGTAGTAAAGTAATTACAATA TAGTAGCCAATATGGTTTGTCTAAGGTACACTAGTTGCTAATTGATAACA AGAAACACAAAGTTAATCAATGTTCCATAATCAATGGAACCTGGCTTTTC CTTTGCCTGGCAGCAGGGAACTTTGATTTCCAGGGATTAATTTCCAGTAT TTTATAACAAATGTCCAGAAGGGTGTCAAACCTCACAAAGACATCTAAAT GCAAAGCTCTTCCAGGGTTCCTTGACTGCCAGGACTTGAATGACTCAATA TTAGCGGATGGCTTGGGGCTGGGAAAGGAGAGAAAAAGGAAGGAAGAGGA ATCACGACAACTACTAGATTCCTGGAATATGCCAAAGGCCTCCTGCCCCC ACCTTTTCACAGGTAAGCAGGTGGCCTTGCCCTTACCGAGGACTACATGA ACTGACACTTATCCTCCTTCTTTACGTGCTTTGCAGGACTTTTCTTGTTT TAACCCCCCTTGAACCCTATCCAATGACACCTTT	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXACACAGTTGAATCCTTCTCAACAGTCTGTTTTACG GGAACACTTCATTACCACCGTTCCCCAGCTGAAGAGTTCTGAATTCATGC AGTTGAATCCTTCTCAACAGTCTGTTTTATGGGAACACTTCATTACCATG ACCCGCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCCGGTGATGG TAACTGTCCCAGGTTTTCTCGTCCCAGGATTTCTCGTCCCAGGTCTTCTC GTTCTGGGTCTTCTCGTCCCGGGTCTTCTCGTCCCGGGTTTCTCGTCACC AACTCTTCCCGAGTTTCGGCACCAACTCTTTCACGCGTTCACGCGACTGG CCAGGAAAGAGGCAACAAACCAGAATCTTCTGCGGCAAAAGCTTTATTGC TTACATCTTCAGGAGCCAGAGAGCAAGAGTGCAAGAGAGAGAGAAAGAAC AAGAAAGCAAGAGAGAGAAAGCAAGAACAAGAGAGAGAATAAGCAAGAAC AAGAGAGAGAAAAAGCTAGAACTAGAGAGAGAAATAGCTTGAACTAGAGA GAGAAAAAGCCAGACCTAGAGAGAGAATAAGCACGAACCAGAGAGAGAAA ACACTAGAATCAGATAGACGAAAAGCTTGAACCGTAGAGAGAGAAAGATT GGGATAACCCCGTCCCTTTTAATGAAGAATTATCCCCGCCTAA
quality values	Open. Hide. 6 6 6 6 9 10 13 13 11 10 10 10 22 30 50 29 29 22 15 15 9 12 9 9 9 9 9 12 18 21 28 21 14 18 18 25 30 59 59 30 23 24 30 29 24 25 22 17 9 11 11 11 11 10 10 23 23 29 30 40 37 37 44 30 35 30 30 36 35 57 57 57 57 57 57 48 48 50 53 50 50 57 57 50 68 68 51 68 68 68 50 53 59 59 42 42 42 47 47 51 57 51 50 50 47 47 51 57 50 50 47 47 47 50 57 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 51 50 50 50 50 57 57 68 68 68 68 68 68 68 68 57 57 59 59 57 57 57 68 68 68 59 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 68 68 68 57 59 57 57 57 59 57 68 68 68 68 68 68 68 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 44 43 43 39 35 35 35 43 43 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 57 57 57 57 59 59 68 68 57 57 57 57 57 57 59 68 68 68 59 59 57 57 52 52 52 57 59 57 52 52 52 57 57 68 68 57 57 57 57 57 57 57 57 52 52 52 57 57 57 57 68 68 59 59 57 57 57 57 57 57 44 44 32 37 37 43 50 50 57 52 52 52 52 52 52 50 44 43 28 25 32 32 42 35 43 35 43 43 43 44 44 47 47 47 57 43 43 43 47 47 48 47 47 44 44 48 48 47 46 43 43 43 44 57 57 43 43 44 44 48 59 59 57 57 47 43 43 44 59 59 43 48 48 57 54 54 54 54 54 57 43 42 35 29 31 28 34 39 48 48 48 59 43 43 41 40 43 43 43 43 43 43 30 30 18 18 26 26 19 25 15 13 8 9 10 19 21 20 24 24 23 32 28 26 32 28 28 28 25 25 18 22 28 28 15 28 28 28 28 28 22 15 13 13 14 26 19 18 18 13 13 14 18 20 18 11 11 11 19 21 28 28 34 34 37 20 20 9 9 9 18 18 34 22 16 12 8 8 9 12 15 15 28 28 30 37 37 17 11 10 10 10 15 25 37 43 32 28 28 19 17 11 12 10 8 13 14 26 11 10 6 6 6 6 8 8 6 6 6 10 10 9 9 12 9 9 10 10 8 8 13 13 12 14 9 9 7 6 8 8 10 11 8 8 8 8 6 6 10 10 16 20 23 23 23 18 16 11 11 11 11 11 11 10 10 9 10 9 9 9 10 10 13 8 8 7 10 8 8 9 9 9 10 8 6 6 8 8 8 6 6 8 12 9 10 9 7 6 6 6 10 8 9 11 12 11 12 13 13 11 17 16 20 6 6 6 6 6 6 10 10 10 10 10 10 13 11 8 8 6 6 8 8 18 18 16	Open. Hide. 8 8 8 8 9 11 29 41 44 44 41 37 37 37 31 31 37 28 21 15 8 8 8 10 10 10 29 22 13 17 17 20 22 37 37 32 32 39 30 30 30 37 33 33 44 44 37 30 24 25 21 26 31 31 33 42 41 59 59 37 37 36 36 37 37 42 42 42 48 68 68 68 68 68 53 68 68 68 68 68 68 68 53 50 54 50 53 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 50 50 50 50 50 51 51 50 50 50 50 51 57 57 57 57 57 57 57 57 68 68 68 68 68 68 51 51 50 50 50 50 68 51 51 51 68 68 51 51 51 51 68 68 68 68 68 51 50 50 50 50 50 57 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 52 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 59 57 57 57 57 68 68 57 57 54 54 54 59 59 57 57 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 50 43 37 37 43 50 57 68 68 68 68 59 59 57 54 54 54 59 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 59 59 57 57 57 68 57 57 54 48 48 57 57 57 59 59 59 59 59 59 57 43 43 41 39 39 32 32 35 47 59 59 59 47 47 47 47 44 44 36 36 35 36 36 41 39 46 47 47 39 39 35 37 39 39 40 43 43 43 48 37 34 28 23 23 28 28 29 27 25 20 22 32 34 37 37 37 33 22 13 8 8 8 15 19 28 32 32 39 34 37 44 44 41 41 41 46 46 43 43 41 37 31 31 35 31 32 20 20 20 28 28 22 17 17 17 24 30 37 39 37 30 31 12 10 10 10 10 13 10 11 11 14 14 14 11 11 11 18 18 25 25 33 31 23 14 14 14 13 8 6 6 6 8 8 9 10 12 12 10 15 15 20 15 28 13 8 6 6 6 6 7 19 13 10 11 11 15 14 11 14 13 16 16 23 23 28 28 25 19 14 15 13 13 10 8 8 8 8 8 8 8 8 8 8 8 12 12 8 6 6 6 8 8 8 8 10 8 8 8 8 14 15 9 9 9 9 12 17 11 12 11 12 9 9 8 8 13 15 11 9 11 11 10 10 10 8 8 8 8 12 16 10 10 8 10 8 12 13 14 11 12 13 10 10 10 12 10 8 8 7 8 6 6 8 6 11 12 14 11 11 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no346_l14.b1 MSMg01no346_l14.b1 CHROMAT_FILE:
MSMg01no346_l14.b1 PHD_FILE: MSMg01no346_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:29 2005
         (449 letters)



>mm_chr9_18475772_18476621
          Length = 850

 Score =  752 bits (389), Expect = 0.0
 Identities = 436/453 (96%), Gaps = 4/453 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattggactccaatatctactgatcccgttattcatgagagatcttttcagacttcaaat 60
           ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 198 cattggactccaatatctactgatccccttatccatgagagatcttttcagacttcaaat 257

                                                                       
Query: 61  tgatactcaatattaaaggtatcaccaaaacctataaaacataatgtttgtttttagcct 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 258 tgatactcaatattaaaggtatcaccaaaacctgtaaaacataatgtttgtttttagcct 317

                                                                       
Query: 121 ctacatacttgactacattgaacataaactaggcacaataagttaacaataatgagtagt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 318 ctacatacttgactacattgaacataaactaggcacaataagttaacaataatgagtaat 377

                                                                       
Query: 181 aaagtaattacaatatagtag---ccaatatggtttgtctaaggtacactagttgctaat 237
           |||||||||||||||||||||   ||||||| ||||||||||||| ||||||||||||||
Sbjct: 378 aaagtaattacaatatagtagtagccaatatagtttgtctaaggtgcactagttgctaat 437

                                                                       
Query: 238 tgataacaagaaacacaaagttaatcaatgttccataatcaatggaacctggcttttc-c 296
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 438 tgataacaagaaacacaaagttaatcaatgttccataatcaatggaacctcgcttttcac 497

                                                                       
Query: 297 tttgcctggcagcagggaactttgatttccagggattaatttccagtattttataacaaa 356
           |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 498 tttgcctggcagcagggaacttggatttccagggattcatttccagtattttataacaaa 557

                                                                       
Query: 357 tgtccagaagggtgtcaaacctcacaaagacatctaaatgcaaagctcttccagggttcc 416
           ||||| ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 558 tgtccggaaaggtgtcaaaccccacaaagacatccaaatgcaaagctcttccagggttcc 617

                                            
Query: 417 ttgactgccaggacttgaatgactcaatattag 449
           |||||||||||||||||||||||||||||||||
Sbjct: 618 ttgactgccaggacttgaatgactcaatattag 650


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 850
Length adjustment: 10
Effective length of query: 439
Effective length of database: 840
Effective search space:   368760
Effective search space used:   368760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information